Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
TOP2AP11388 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.96□□□□□ -1.94
TOP2AP11388 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TOP2AP11388 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TOP2AP11388 RNU4-13P-201ENST00000364019 141 ntBASIC2.96□□□□□ -1.94
TOP2AP11388 AL121972.1-201ENST00000402023 252 ntBASIC2.96□□□□□ -1.94
TOP2AP11388 HMGN2P35-201ENST00000412164 270 ntBASIC2.96□□□□□ -1.94
TOP2AP11388 RPL17P12-201ENST00000413391 526 ntBASIC2.96□□□□□ -1.94
TOP2AP11388 Z73417.1-201ENST00000447373 778 ntBASIC2.96□□□□□ -1.94
TOP2AP11388 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.96□□□□□ -1.94
TOP2AP11388 IFNWP4-201ENST00000453148 294 ntBASIC2.96□□□□□ -1.94
TOP2AP11388 ARL2BPP2-201ENST00000550907 489 ntBASIC2.96□□□□□ -1.94
TOP2AP11388 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.96□□□□□ -1.94
TOP2AP11388 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.95□□□□□ -1.94
TOP2AP11388 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.95□□□□□ -1.94
TOP2AP11388 MIR591-201ENST00000385290 95 ntBASIC2.95□□□□□ -1.94
TOP2AP11388 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TOP2AP11388 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.95□□□□□ -1.94
TOP2AP11388 AMD1P1-201ENST00000457220 922 ntBASIC2.95□□□□□ -1.94
TOP2AP11388 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.95□□□□□ -1.94
TOP2AP11388 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.95□□□□□ -1.94
TOP2AP11388 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.95□□□□□ -1.94
TOP2AP11388 AC104581.2-201ENST00000572227 430 ntBASIC2.95□□□□□ -1.94
TOP2AP11388 KATNBL1P1-201ENST00000605192 748 ntBASIC2.95□□□□□ -1.94
TOP2AP11388 BX248123.2-201ENST00000606318 124 ntBASIC2.95□□□□□ -1.94
TOP2AP11388 AC016877.3-201ENST00000606778 504 ntBASIC2.95□□□□□ -1.94
TOP2AP11388 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
TOP2AP11388 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.95□□□□□ -1.94
TOP2AP11388 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.95□□□□□ -1.94
TOP2AP11388 RNU6-392P-201ENST00000364926 101 ntBASIC2.94□□□□□ -1.94
TOP2AP11388 RSL24D1P2-201ENST00000445584 366 ntBASIC2.94□□□□□ -1.94
TOP2AP11388 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.94□□□□□ -1.94
TOP2AP11388 AP003385.6-201ENST00000531603 374 ntBASIC2.94□□□□□ -1.94
TOP2AP11388 AC007375.1-201ENST00000554513 578 ntBASIC2.94□□□□□ -1.94
TOP2AP11388 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.94□□□□□ -1.94
TOP2AP11388 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.94□□□□□ -1.94
TOP2AP11388 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.94□□□□□ -1.94
TOP2AP11388 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.94□□□□□ -1.94
TOP2AP11388 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.93□□□□□ -1.94
TOP2AP11388 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.93□□□□□ -1.94
TOP2AP11388 WARS2P1-201ENST00000429678 537 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 HMGB1P27-201ENST00000431429 603 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 AC090071.1-201ENST00000507713 644 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 RNU1-40P-201ENST00000516816 164 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 RNU1-97P-201ENST00000516872 164 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 RN7SKP96-201ENST00000516948 297 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.93□□□□□ -1.94
TOP2AP11388 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.93□□□□□ -1.94
TOP2AP11388 DCAF13P1-201ENST00000495256 1330 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 Y_RNA.40-201ENST00000362645 93 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 RN7SKP101-201ENST00000411376 320 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 AC004965.1-201ENST00000413033 213 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 AC092473.1-201ENST00000441098 221 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 HSPE1P28-201ENST00000443139 211 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.93□□□□□ -1.94
TOP2AP11388 SNRPGP3-201ENST00000469405 227 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 AC069528.1-202ENST00000482888 637 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 MIR4419B-201ENST00000577260 68 ntBASIC2.93□□□□□ -1.94
TOP2AP11388 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
TOP2AP11388 ZNF876P-202ENST00000398732 1485 ntBASIC2.92□□□□□ -1.94
TOP2AP11388 TAS2R15P-201ENST00000390674 928 ntBASIC2.92□□□□□ -1.94
TOP2AP11388 UBE2V2P1-201ENST00000434717 398 ntBASIC2.92□□□□□ -1.94
TOP2AP11388 BNIP3P2-201ENST00000441221 577 ntBASIC2.92□□□□□ -1.94
TOP2AP11388 OR7L1P-201ENST00000456181 380 ntBASIC2.92□□□□□ -1.94
TOP2AP11388 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.92□□□□□ -1.94
TOP2AP11388 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.92□□□□□ -1.94
TOP2AP11388 OR8X1P-201ENST00000534542 869 ntBASIC2.92□□□□□ -1.94
TOP2AP11388 AL049838.1-201ENST00000563647 981 ntBASIC2.92□□□□□ -1.94
TOP2AP11388 AC104307.1-201ENST00000616142 196 ntBASIC2.92□□□□□ -1.94
TOP2AP11388 AC004943.3-201ENST00000624116 600 ntBASIC2.92□□□□□ -1.94
TOP2AP11388 AC110774.1-201ENST00000623567 2018 ntBASIC2.92□□□□□ -1.94
TOP2AP11388 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TOP2AP11388 AC240504.1-201ENST00000395709 845 ntBASIC2.91□□□□□ -1.94
TOP2AP11388 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.91□□□□□ -1.94
TOP2AP11388 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.91□□□□□ -1.94
TOP2AP11388 TRMT112P2-201ENST00000512910 132 ntBASIC2.91□□□□□ -1.94
TOP2AP11388 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.91□□□□□ -1.94
TOP2AP11388 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.91□□□□□ -1.94
TOP2AP11388 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.91□□□□□ -1.94
TOP2AP11388 MTND4P23-201ENST00000447723 1363 ntBASIC2.91□□□□□ -1.94
TOP2AP11388 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TOP2AP11388 RNU1-57P-201ENST00000384491 166 ntBASIC2.9□□□□□ -1.95
TOP2AP11388 VN1R31P-201ENST00000417498 730 ntBASIC2.9□□□□□ -1.95
TOP2AP11388 AC011753.1-201ENST00000451001 220 ntBASIC2.9□□□□□ -1.95
TOP2AP11388 RPS26P21-201ENST00000475397 348 ntBASIC2.9□□□□□ -1.95
TOP2AP11388 AC098799.2-201ENST00000509466 868 ntBASIC2.9□□□□□ -1.95
TOP2AP11388 SNORA31.15-201ENST00000516771 132 ntBASIC2.9□□□□□ -1.95
TOP2AP11388 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.9□□□□□ -1.95
TOP2AP11388 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.9□□□□□ -1.95
TOP2AP11388 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.9□□□□□ -1.95
TOP2AP11388 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
TOP2AP11388 AC012150.2-201ENST00000621300 544 ntBASIC2.9□□□□□ -1.95
TOP2AP11388 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TOP2AP11388 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.9□□□□□ -1.95
TOP2AP11388 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.9□□□□□ -1.95
TOP2AP11388 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TOP2AP11388 SNORD48-201ENST00000364953 64 ntBASIC2.89□□□□□ -1.95
TOP2AP11388 MIR499A-201ENST00000384903 122 ntBASIC2.89□□□□□ -1.95
TOP2AP11388 BX510359.4-201ENST00000423750 193 ntBASIC2.89□□□□□ -1.95
TOP2AP11388 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms