Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 MIR6798-201ENST00000612887 67 ntBASIC4.09□□□□□ -1.75
PF4V1P10720 uc_338.32-201ENST00000615087 172 ntBASIC4.09□□□□□ -1.75
PF4V1P10720 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.09□□□□□ -1.75
PF4V1P10720 YWHAEP7-203ENST00000622054 312 ntBASIC4.09□□□□□ -1.75
PF4V1P10720 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.09□□□□□ -1.75
PF4V1P10720 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.09□□□□□ -1.75
PF4V1P10720 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PF4V1P10720 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PF4V1P10720 AC006206.1-201ENST00000544842 3387 ntBASIC4.09□□□□□ -1.76
PF4V1P10720 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PF4V1P10720 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PF4V1P10720 AC007785.2-201ENST00000598627 1916 ntBASIC4.09□□□□□ -1.76
PF4V1P10720 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PF4V1P10720 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PF4V1P10720 AC092376.2-201ENST00000622621 4116 ntBASIC4.09□□□□□ -1.76
PF4V1P10720 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PF4V1P10720 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
PF4V1P10720 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 MAPK10-303ENST00000641324 3959 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 Y_RNA.89-201ENST00000363031 102 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 RNA5SP443-201ENST00000363083 132 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 RNU6-1167P-201ENST00000363227 94 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 RNA5SP90-201ENST00000364801 99 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 MIR589-201ENST00000385238 99 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PF4V1P10720 AL035079.1-201ENST00000405210 287 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 RPS12P24-201ENST00000412619 387 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.08□□□□□ -1.76
PF4V1P10720 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 SNRPEP10-201ENST00000420249 274 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 UBE2D3P2-201ENST00000424409 445 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 MTND1P2-201ENST00000430604 821 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.08□□□□□ -1.76
PF4V1P10720 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.08□□□□□ -1.76
PF4V1P10720 AC073415.1-201ENST00000449240 153 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.08□□□□□ -1.76
PF4V1P10720 AC091180.1-201ENST00000462104 372 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 RPL39P36-201ENST00000490784 156 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 CEACAMP10-202ENST00000495431 496 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 HMGB3P15-201ENST00000507326 574 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.08□□□□□ -1.76
PF4V1P10720 APOOP4-201ENST00000513530 597 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PF4V1P10720 Y_RNA.689-201ENST00000516589 107 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 RN7SKP219-201ENST00000516825 296 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 RANP9-201ENST00000519957 271 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 AC118273.1-201ENST00000525324 3006 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PF4V1P10720 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.08□□□□□ -1.76
PF4V1P10720 TRAV28-201ENST00000557548 323 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.08□□□□□ -1.76
PF4V1P10720 RN7SL290P-201ENST00000578661 300 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 AC008521.1-201ENST00000587471 187 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 AC008945.2-201ENST00000606056 604 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 AC022893.3-201ENST00000607665 437 ntBASIC4.08□□□□□ -1.76
PF4V1P10720 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PF4V1P10720 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PF4V1P10720 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PF4V1P10720 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.08□□□□□ -1.76
PF4V1P10720 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PF4V1P10720 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PF4V1P10720 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.07□□□□□ -1.76
PF4V1P10720 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.07□□□□□ -1.76
PF4V1P10720 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.07□□□□□ -1.76
PF4V1P10720 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PF4V1P10720 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PF4V1P10720 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PF4V1P10720 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PF4V1P10720 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PF4V1P10720 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.07□□□□□ -1.76
PF4V1P10720 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PF4V1P10720 UBE2L2-201ENST00000254302 429 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 RNU6-1287P-201ENST00000362914 107 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 RNU6-288P-201ENST00000363690 104 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 RNU6-534P-201ENST00000364877 106 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PF4V1P10720 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.07□□□□□ -1.76
PF4V1P10720 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.07□□□□□ -1.76
PF4V1P10720 RNU6-877P-201ENST00000383868 107 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 RNU6-1060P-201ENST00000384664 107 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 AL139397.2-201ENST00000404529 772 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 HSPE1P8-201ENST00000406997 288 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 AL591034.1-201ENST00000407447 340 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 RN7SKP216-201ENST00000411050 312 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 GPS2P1-201ENST00000411761 986 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.07□□□□□ -1.76
PF4V1P10720 SNRPFP1-201ENST00000414761 252 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 MTND1P23-201ENST00000416931 372 ntBASIC4.07□□□□□ -1.76
PF4V1P10720 AL161631.1-201ENST00000417933 486 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms