Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
FREM3P0C091 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
FREM3P0C091 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
FREM3P0C091 AC023158.1-201ENST00000561632 1025 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.93□□□□□ -2.1
FREM3P0C091 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.93□□□□□ -2.1
FREM3P0C091 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.93□□□□□ -2.1
FREM3P0C091 AL049779.4-201ENST00000604500 156 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
FREM3P0C091 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.93□□□□□ -2.1
FREM3P0C091 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.93□□□□□ -2.1
FREM3P0C091 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
FREM3P0C091 MIR221-201ENST00000385135 110 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 AL079342.1-201ENST00000401460 267 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 AC005517.2-201ENST00000424673 553 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 HIGD1AP11-201ENST00000438361 280 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 ELOCP13-201ENST00000443934 329 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
FREM3P0C091 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.93□□□□□ -2.1
FREM3P0C091 AC004062.1-201ENST00000509926 645 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 AC108157.1-201ENST00000510511 539 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 MTCYBP37-201ENST00000510642 1133 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 RNU1-61P-201ENST00000516107 151 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.93□□□□□ -2.1
FREM3P0C091 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.93□□□□□ -2.1
FREM3P0C091 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.93□□□□□ -2.1
FREM3P0C091 AK6P1-201ENST00000540219 478 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.93□□□□□ -2.1
FREM3P0C091 SNRPGP18-201ENST00000553000 214 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 AL049870.4-201ENST00000555741 486 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 SNORD84-203ENST00000584275 78 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.93□□□□□ -2.1
FREM3P0C091 HMGB1P51-201ENST00000605166 638 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.93□□□□□ -2.1
FREM3P0C091 AC011890.2-201ENST00000613393 294 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 AC034102.8-201ENST00000615146 484 ntBASIC1.93□□□□□ -2.1
FREM3P0C091 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.93□□□□□ -2.1
FREM3P0C091 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.93□□□□□ -2.1
FREM3P0C091 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
FREM3P0C091 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
FREM3P0C091 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.92□□□□□ -2.1
FREM3P0C091 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
FREM3P0C091 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.92□□□□□ -2.1
FREM3P0C091 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
FREM3P0C091 SNORD56.5-201ENST00000364281 72 ntBASIC1.92□□□□□ -2.1
FREM3P0C091 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
FREM3P0C091 MIR1289-2-201ENST00000408360 111 ntBASIC1.92□□□□□ -2.1
FREM3P0C091 SSXP9-201ENST00000417503 292 ntBASIC1.92□□□□□ -2.1
FREM3P0C091 RPS15AP40-201ENST00000419621 391 ntBASIC1.92□□□□□ -2.1
FREM3P0C091 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.92□□□□□ -2.1
FREM3P0C091 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
FREM3P0C091 AL627224.1-201ENST00000448334 444 ntBASIC1.92□□□□□ -2.1
FREM3P0C091 RPL21P99-201ENST00000480369 423 ntBASIC1.92□□□□□ -2.1
FREM3P0C091 AC022690.1-201ENST00000526681 550 ntBASIC1.92□□□□□ -2.1
FREM3P0C091 POLR2KP1-201ENST00000553226 168 ntBASIC1.92□□□□□ -2.1
FREM3P0C091 AL163153.1-201ENST00000554223 283 ntBASIC1.92□□□□□ -2.1
FREM3P0C091 AC090751.1-201ENST00000566966 267 ntBASIC1.92□□□□□ -2.1
FREM3P0C091 AC025281.1-201ENST00000567026 265 ntBASIC1.92□□□□□ -2.1
FREM3P0C091 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.92□□□□□ -2.1
FREM3P0C091 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
FREM3P0C091 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.92□□□□□ -2.1
FREM3P0C091 U3.37-201ENST00000408528 213 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 SNORA11.4-201ENST00000408823 129 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.91□□□□□ -2.1
FREM3P0C091 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.91□□□□□ -2.1
FREM3P0C091 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.91□□□□□ -2.1
FREM3P0C091 AC104435.1-201ENST00000483483 166 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 FAM172BP-201ENST00000487497 1089 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.91□□□□□ -2.1
FREM3P0C091 RNA5SP200-201ENST00000516360 103 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 AC025857.1-201ENST00000525252 377 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.91□□□□□ -2.1
FREM3P0C091 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.91□□□□□ -2.1
FREM3P0C091 AC135628.1-201ENST00000568867 534 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.91□□□□□ -2.1
FREM3P0C091 COX6CP3-201ENST00000580869 223 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.91□□□□□ -2.1
FREM3P0C091 AL590282.1-201ENST00000610379 1136 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 AC010378.1-201ENST00000619270 362 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
FREM3P0C091 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.91□□□□□ -2.1
FREM3P0C091 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.91□□□□□ -2.1
FREM3P0C091 VTRNA1-1-201ENST00000363120 99 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
FREM3P0C091 RNU6-629P-201ENST00000384061 103 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 RPS3AP26-201ENST00000398259 784 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 AC109583.1-201ENST00000432156 268 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.91□□□□□ -2.1
FREM3P0C091 AC004866.2-201ENST00000438285 481 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 ARL5AP3-201ENST00000439327 386 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.91□□□□□ -2.1
FREM3P0C091 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.91□□□□□ -2.1
FREM3P0C091 AC096992.1-201ENST00000459808 709 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.91□□□□□ -2.1
FREM3P0C091 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.91□□□□□ -2.1
FREM3P0C091 GZMAP1-201ENST00000503054 631 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
FREM3P0C091 Y_RNA.676-201ENST00000516393 96 ntBASIC1.91□□□□□ -2.1
FREM3P0C091 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.91□□□□□ -2.1
FREM3P0C091 AC008562.1-201ENST00000521763 330 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms