Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.75□□□□□ -1.65
SNRPA1P09661 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.75□□□□□ -1.65
SNRPA1P09661 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.75□□□□□ -1.65
SNRPA1P09661 CYCSP4-201ENST00000429682 331 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 AL358934.1-201ENST00000432346 324 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 AL159987.2-201ENST00000432754 307 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 MTND4LP10-201ENST00000435146 291 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 RSU1P2-202ENST00000437884 485 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 SKP1P1-201ENST00000438081 489 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 RPL23AP16-201ENST00000441715 421 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 MTND6P13-201ENST00000443510 523 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 RPL7P36-201ENST00000444633 681 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 GAPDHP17-201ENST00000449858 1001 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 BX322784.1-201ENST00000455793 1077 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 HMGB1P36-201ENST00000487709 576 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 AC012170.1-201ENST00000495139 359 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.75□□□□□ -1.65
SNRPA1P09661 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SNRPA1P09661 AC069240.1-201ENST00000548774 375 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 RPL21P5-201ENST00000554662 472 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 AC010591.1-201ENST00000603941 649 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.75□□□□□ -1.65
SNRPA1P09661 MIR7975-201ENST00000619350 68 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
SNRPA1P09661 RNU6-156P-201ENST00000621869 107 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 AC068880.5-201ENST00000624331 290 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 MIR6863-201ENST00000636112 90 ntBASIC4.75□□□□□ -1.65
SNRPA1P09661 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SNRPA1P09661 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNRPA1P09661 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNRPA1P09661 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.75□□□□□ -1.65
SNRPA1P09661 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.75□□□□□ -1.65
SNRPA1P09661 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SNRPA1P09661 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNRPA1P09661 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNRPA1P09661 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNRPA1P09661 LINC02471-203ENST00000641941 4752 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNRPA1P09661 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNRPA1P09661 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SNRPA1P09661 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.74□□□□□ -1.65
SNRPA1P09661 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNRPA1P09661 AC007685.1-201ENST00000329806 452 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNRPA1P09661 RNY4P34-201ENST00000364779 95 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 PTMAP5-201ENST00000393073 333 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNRPA1P09661 TPMTP2-201ENST00000414372 726 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.74□□□□□ -1.65
SNRPA1P09661 BX295541.1-201ENST00000417774 250 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 AC245054.1-201ENST00000420944 258 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.74□□□□□ -1.65
SNRPA1P09661 AL138785.1-201ENST00000425821 331 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 AL031736.2-201ENST00000426573 787 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 ELOCP18-201ENST00000434209 337 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 AL451074.3-201ENST00000437709 472 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNRPA1P09661 ARPC3P5-201ENST00000448802 534 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 PSPHP1-201ENST00000450062 261 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 AC013267.1-201ENST00000458227 267 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 PLGLA-201ENST00000465668 449 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 RPL31P58-201ENST00000469001 379 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNRPA1P09661 RPL31P50-201ENST00000471002 296 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.74□□□□□ -1.65
SNRPA1P09661 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.74□□□□□ -1.65
SNRPA1P09661 FAM92A1P2-202ENST00000504766 877 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.74□□□□□ -1.65
SNRPA1P09661 AC108078.1-201ENST00000508073 725 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 AC024589.1-201ENST00000512207 263 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 OR5AP1P-201ENST00000529730 940 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.74□□□□□ -1.65
SNRPA1P09661 ZNF705CP-201ENST00000530515 889 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.74□□□□□ -1.65
SNRPA1P09661 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.74□□□□□ -1.65
SNRPA1P09661 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.74□□□□□ -1.65
SNRPA1P09661 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.74□□□□□ -1.65
SNRPA1P09661 AC011451.2-201ENST00000604303 598 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 AP006248.2-201ENST00000623309 592 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 AL049781.1-201ENST00000623195 3585 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 AC007823.1-201ENST00000569932 1566 ntBASIC4.74□□□□□ -1.65
SNRPA1P09661 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SNRPA1P09661 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SNRPA1P09661 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNRPA1P09661 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SNRPA1P09661 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNRPA1P09661 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNRPA1P09661 OR52B1P-201ENST00000316506 909 ntBASIC4.73□□□□□ -1.65
SNRPA1P09661 RPL23AP57-201ENST00000332361 466 ntBASIC4.73□□□□□ -1.65
SNRPA1P09661 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SNRPA1P09661 RNA5SP72-201ENST00000364442 117 ntBASIC4.73□□□□□ -1.65
SNRPA1P09661 AL023807.1-201ENST00000407932 359 ntBASIC4.73□□□□□ -1.65
SNRPA1P09661 RNU6-195P-201ENST00000411352 109 ntBASIC4.73□□□□□ -1.65
SNRPA1P09661 AL133384.1-201ENST00000412744 351 ntBASIC4.73□□□□□ -1.65
SNRPA1P09661 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.73□□□□□ -1.65
SNRPA1P09661 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.73□□□□□ -1.65
SNRPA1P09661 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.73□□□□□ -1.65
SNRPA1P09661 AL662791.1-201ENST00000441992 928 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms