Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC018638.7-201ENST00000605836 1114 ntBASIC3.82□□□□□ -1.8
RB1P06400 MIR7112-201ENST00000616126 65 ntBASIC3.82□□□□□ -1.8
RB1P06400 AL732618.1-201ENST00000623251 301 ntBASIC3.82□□□□□ -1.8
RB1P06400 AP003355.3-201ENST00000623465 114 ntBASIC3.82□□□□□ -1.8
RB1P06400 AL356596.1-201ENST00000624230 379 ntBASIC3.82□□□□□ -1.8
RB1P06400 AC009039.2-201ENST00000624524 529 ntBASIC3.82□□□□□ -1.8
RB1P06400 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.82□□□□□ -1.8
RB1P06400 OTUD4P1-201ENST00000237841 3067 ntBASIC3.82□□□□□ -1.8
RB1P06400 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RB1P06400 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.82□□□□□ -1.8
RB1P06400 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RB1P06400 AC010733.2-201ENST00000589496 5702 ntBASIC3.82□□□□□ -1.8
RB1P06400 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RB1P06400 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
RB1P06400 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RB1P06400 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
RB1P06400 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RB1P06400 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.81□□□□□ -1.8
RB1P06400 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.81□□□□□ -1.8
RB1P06400 GNG5P1-201ENST00000255500 204 ntBASIC3.81□□□□□ -1.8
RB1P06400 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RB1P06400 AL161781.1-201ENST00000354277 403 ntBASIC3.81□□□□□ -1.8
RB1P06400 RNU6-600P-201ENST00000362524 99 ntBASIC3.81□□□□□ -1.8
RB1P06400 Y_RNA.302-201ENST00000364997 102 ntBASIC3.81□□□□□ -1.8
RB1P06400 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.81□□□□□ -1.8
RB1P06400 RNU2-47P-201ENST00000410649 186 ntBASIC3.81□□□□□ -1.8
RB1P06400 HSFY4P-201ENST00000415994 1181 ntBASIC3.81□□□□□ -1.8
RB1P06400 AL137014.1-201ENST00000420490 1226 ntBASIC3.81□□□□□ -1.8
RB1P06400 UBE2FP3-201ENST00000436366 524 ntBASIC3.81□□□□□ -1.8
RB1P06400 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.81□□□□□ -1.8
RB1P06400 AC099563.1-201ENST00000456086 418 ntBASIC3.81□□□□□ -1.8
RB1P06400 U3.44-201ENST00000458938 192 ntBASIC3.81□□□□□ -1.8
RB1P06400 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.81□□□□□ -1.8
RB1P06400 HMGB1P36-201ENST00000487709 576 ntBASIC3.81□□□□□ -1.8
RB1P06400 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RB1P06400 AC093663.1-201ENST00000497190 394 ntBASIC3.81□□□□□ -1.8
RB1P06400 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.81□□□□□ -1.8
RB1P06400 MRPS33P3-201ENST00000513456 322 ntBASIC3.81□□□□□ -1.8
RB1P06400 OR5AP1P-201ENST00000529730 940 ntBASIC3.81□□□□□ -1.8
RB1P06400 CR383656.7-201ENST00000548164 174 ntBASIC3.81□□□□□ -1.8
RB1P06400 AC008015.1-201ENST00000555505 465 ntBASIC3.81□□□□□ -1.8
RB1P06400 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.81□□□□□ -1.8
RB1P06400 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.81□□□□□ -1.8
RB1P06400 SNORD84-203ENST00000584275 78 ntBASIC3.81□□□□□ -1.8
RB1P06400 DUXAP11-201ENST00000603858 526 ntBASIC3.81□□□□□ -1.8
RB1P06400 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.81□□□□□ -1.8
RB1P06400 AL031667.3-201ENST00000620124 655 ntBASIC3.81□□□□□ -1.8
RB1P06400 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.81□□□□□ -1.8
RB1P06400 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.81□□□□□ -1.8
RB1P06400 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.81□□□□□ -1.8
RB1P06400 AL645937.1-201ENST00000641739 1652 ntBASIC3.81□□□□□ -1.8
RB1P06400 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RB1P06400 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RB1P06400 AL035425.3-201ENST00000564206 4996 ntBASIC3.8□□□□□ -1.8
RB1P06400 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RB1P06400 RNU6-1155P-201ENST00000363554 107 ntBASIC3.8□□□□□ -1.8
RB1P06400 U3.26-201ENST00000391236 204 ntBASIC3.8□□□□□ -1.8
RB1P06400 AL049545.1-201ENST00000401856 572 ntBASIC3.8□□□□□ -1.8
RB1P06400 MIR320C1-201ENST00000408566 88 ntBASIC3.8□□□□□ -1.8
RB1P06400 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.8□□□□□ -1.8
RB1P06400 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RB1P06400 RN7SKP56-201ENST00000410513 331 ntBASIC3.8□□□□□ -1.8
RB1P06400 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.8□□□□□ -1.8
RB1P06400 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.8□□□□□ -1.8
RB1P06400 MTND1P20-201ENST00000430341 950 ntBASIC3.8□□□□□ -1.8
RB1P06400 AC087650.1-201ENST00000431445 468 ntBASIC3.8□□□□□ -1.8
RB1P06400 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.8□□□□□ -1.8
RB1P06400 OR6C5P-201ENST00000452388 923 ntBASIC3.8□□□□□ -1.8
RB1P06400 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.8□□□□□ -1.8
RB1P06400 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.8□□□□□ -1.8
RB1P06400 RPL7P23-201ENST00000493874 747 ntBASIC3.8□□□□□ -1.8
RB1P06400 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.8□□□□□ -1.8
RB1P06400 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.8□□□□□ -1.8
RB1P06400 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.8□□□□□ -1.8
RB1P06400 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.8□□□□□ -1.8
RB1P06400 RN7SKP244-201ENST00000516513 307 ntBASIC3.8□□□□□ -1.8
RB1P06400 RNU6-678P-201ENST00000516832 109 ntBASIC3.8□□□□□ -1.8
RB1P06400 RNU6-714P-201ENST00000516963 103 ntBASIC3.8□□□□□ -1.8
RB1P06400 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.8□□□□□ -1.8
RB1P06400 AC087276.1-201ENST00000529659 480 ntBASIC3.8□□□□□ -1.8
RB1P06400 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.8□□□□□ -1.8
RB1P06400 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.8□□□□□ -1.8
RB1P06400 MTND3P12-201ENST00000559068 328 ntBASIC3.8□□□□□ -1.8
RB1P06400 AC141257.3-201ENST00000572906 215 ntBASIC3.8□□□□□ -1.8
RB1P06400 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.8□□□□□ -1.8
RB1P06400 MIR4325-201ENST00000583049 90 ntBASIC3.8□□□□□ -1.8
RB1P06400 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.8□□□□□ -1.8
RB1P06400 AL031176.1-201ENST00000604554 466 ntBASIC3.8□□□□□ -1.8
RB1P06400 AC072039.2-201ENST00000608883 439 ntBASIC3.8□□□□□ -1.8
RB1P06400 AL353748.2-201ENST00000622148 471 ntBASIC3.8□□□□□ -1.8
RB1P06400 AC019226.2-201ENST00000625973 424 ntBASIC3.8□□□□□ -1.8
RB1P06400 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.8□□□□□ -1.8
RB1P06400 AC007671.2-201ENST00000637344 619 ntBASIC3.8□□□□□ -1.8
RB1P06400 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RB1P06400 FAM35DP-201ENST00000323387 2712 ntBASIC3.8□□□□□ -1.8
RB1P06400 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RB1P06400 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RB1P06400 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.8□□□□□ -1.8
RB1P06400 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RB1P06400 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms