Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 RN7SL504P-201ENST00000494496 287 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 BOLA3P3-201ENST00000505182 232 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.47□□□□□ -2.01
MT-ND4P03905 SCARNA13-201ENST00000516672 275 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 RN7SKP272-201ENST00000516988 232 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.47□□□□□ -2.01
MT-ND4P03905 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.47□□□□□ -2.01
MT-ND4P03905 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.47□□□□□ -2.01
MT-ND4P03905 FAM60DP-201ENST00000524174 632 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
MT-ND4P03905 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.47□□□□□ -2.01
MT-ND4P03905 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
MT-ND4P03905 AC092451.2-201ENST00000538746 658 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 MTCYBP27-201ENST00000555160 670 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.47□□□□□ -2.01
MT-ND4P03905 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.47□□□□□ -2.01
MT-ND4P03905 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
MT-ND4P03905 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.47□□□□□ -2.01
MT-ND4P03905 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.47□□□□□ -2.01
MT-ND4P03905 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.47□□□□□ -2.01
MT-ND4P03905 AC005046.1-201ENST00000608515 625 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 AL159169.3-201ENST00000608871 561 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 AC018926.1-201ENST00000616335 435 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.47□□□□□ -2.01
MT-ND4P03905 AP000943.4-201ENST00000622912 357 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 CYP3A51P-201ENST00000633513 256 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 MFSD8-245ENST00000641743 948 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
MT-ND4P03905 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.47□□□□□ -2.01
MT-ND4P03905 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.46□□□□□ -2.01
MT-ND4P03905 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
MT-ND4P03905 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 SUGT1P1-201ENST00000379514 476 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 SNORA54-201ENST00000384281 123 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 SNORD51-201ENST00000384320 80 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 RNU6-1300P-201ENST00000391046 108 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 CYCSP45-201ENST00000402289 315 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 AL356057.2-201ENST00000403318 432 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.46□□□□□ -2.02
MT-ND4P03905 LUZP4P1-201ENST00000415420 344 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 YME1L1P1-201ENST00000429435 297 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 AC092393.1-201ENST00000439625 742 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 AL645638.1-201ENST00000440519 361 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.46□□□□□ -2.02
MT-ND4P03905 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
MT-ND4P03905 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.46□□□□□ -2.02
MT-ND4P03905 HMGN1P5-201ENST00000448591 263 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 RPS3AP43-201ENST00000479743 781 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.46□□□□□ -2.02
MT-ND4P03905 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.46□□□□□ -2.02
MT-ND4P03905 MLLT10P2-201ENST00000506434 249 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 AC006390.1-201ENST00000508068 283 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 AC074250.1-201ENST00000511117 192 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 TBCAP3-201ENST00000512475 312 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 AC008885.1-201ENST00000514930 301 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 SNORA9.3-201ENST00000516383 129 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 RNU6-467P-201ENST00000517027 110 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.46□□□□□ -2.02
MT-ND4P03905 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
MT-ND4P03905 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.46□□□□□ -2.02
MT-ND4P03905 FAM60BP-201ENST00000578364 658 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.46□□□□□ -2.02
MT-ND4P03905 BNIP3P19-201ENST00000605397 577 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
MT-ND4P03905 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.46□□□□□ -2.02
MT-ND4P03905 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.46□□□□□ -2.02
MT-ND4P03905 AC012314.7-201ENST00000619693 93 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 MIR6075-201ENST00000620782 95 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.46□□□□□ -2.02
MT-ND4P03905 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
MT-ND4P03905 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
MT-ND4P03905 CUL1P1-201ENST00000509510 2425 ntBASIC2.46□□□□□ -2.02
MT-ND4P03905 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
MT-ND4P03905 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.45□□□□□ -2.02
MT-ND4P03905 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.45□□□□□ -2.02
MT-ND4P03905 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
MT-ND4P03905 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.45□□□□□ -2.02
MT-ND4P03905 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
MT-ND4P03905 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
MT-ND4P03905 VTRNA1-1-201ENST00000363120 99 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 SNORA71.1-201ENST00000364523 117 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 RNU6-707P-201ENST00000364647 95 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 SNORD21-201ENST00000383953 95 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 MIR34B-201ENST00000385076 84 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 RPS4XP3-201ENST00000398541 413 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 AL512633.1-201ENST00000399931 655 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 RPL7P27-201ENST00000403775 720 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 FAT1P1-201ENST00000406588 507 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 RPL23AP74-201ENST00000437246 471 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 ARF4P4-201ENST00000439608 520 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
MT-ND4P03905 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.45□□□□□ -2.02
MT-ND4P03905 AL590664.1-201ENST00000448065 339 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 RPL23AP31-201ENST00000456160 467 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 OR2A20P-203ENST00000498397 1268 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.45□□□□□ -2.02
MT-ND4P03905 AC112198.4-201ENST00000515450 351 ntBASIC2.45□□□□□ -2.02
MT-ND4P03905 RNU6-1095P-201ENST00000516148 108 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms