Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC079610.2-201ENST00000604818 690 ntBASIC2.6□□□□□ -1.99
APOEP02649 AC011890.2-201ENST00000613393 294 ntBASIC2.6□□□□□ -1.99
APOEP02649 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.6□□□□□ -1.99
APOEP02649 AC017104.5-201ENST00000637647 639 ntBASIC2.6□□□□□ -1.99
APOEP02649 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.6□□□□□ -1.99
APOEP02649 AC099654.7-201ENST00000635788 2127 ntBASIC2.6□□□□□ -1.99
APOEP02649 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.6□□□□□ -1.99
APOEP02649 AL512283.1-201ENST00000606756 1384 ntBASIC2.6□□□□□ -1.99
APOEP02649 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
APOEP02649 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
APOEP02649 RNVU1-3-201ENST00000364313 161 ntBASIC2.59□□□□□ -1.99
APOEP02649 SNORA27.3-201ENST00000364937 134 ntBASIC2.59□□□□□ -1.99
APOEP02649 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.59□□□□□ -1.99
APOEP02649 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
APOEP02649 MIR144-201ENST00000384886 86 ntBASIC2.59□□□□□ -1.99
APOEP02649 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
APOEP02649 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.59□□□□□ -1.99
APOEP02649 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.59□□□□□ -1.99
APOEP02649 RPS12P2-201ENST00000439728 269 ntBASIC2.59□□□□□ -1.99
APOEP02649 RPL30P14-201ENST00000482744 348 ntBASIC2.59□□□□□ -1.99
APOEP02649 AC135721.1-201ENST00000497954 479 ntBASIC2.59□□□□□ -1.99
APOEP02649 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
APOEP02649 RNU6-488P-201ENST00000515918 99 ntBASIC2.59□□□□□ -1.99
APOEP02649 RPL7P20-201ENST00000520308 745 ntBASIC2.59□□□□□ -1.99
APOEP02649 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.59□□□□□ -1.99
APOEP02649 AC083923.1-201ENST00000523708 376 ntBASIC2.59□□□□□ -1.99
APOEP02649 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
APOEP02649 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
APOEP02649 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.59□□□□□ -1.99
APOEP02649 AC009097.3-201ENST00000563557 1018 ntBASIC2.59□□□□□ -1.99
APOEP02649 ACTR3BP3-201ENST00000565577 979 ntBASIC2.59□□□□□ -1.99
APOEP02649 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.59□□□□□ -1.99
APOEP02649 AC245036.5-201ENST00000596330 847 ntBASIC2.59□□□□□ -1.99
APOEP02649 DPRXP5-201ENST00000604662 539 ntBASIC2.59□□□□□ -1.99
APOEP02649 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
APOEP02649 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.59□□□□□ -1.99
APOEP02649 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.59□□□□□ -1.99
APOEP02649 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
APOEP02649 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.59□□□□□ -2
APOEP02649 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
APOEP02649 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
APOEP02649 AC046144.1-201ENST00000478559 1853 ntBASIC2.58□□□□□ -2
APOEP02649 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
APOEP02649 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
APOEP02649 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
APOEP02649 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.58□□□□□ -2
APOEP02649 U3.12-201ENST00000364498 214 ntBASIC2.58□□□□□ -2
APOEP02649 SNORA67.1-201ENST00000364749 141 ntBASIC2.58□□□□□ -2
APOEP02649 RNU6-40P-201ENST00000384254 107 ntBASIC2.58□□□□□ -2
APOEP02649 AL356057.1-202ENST00000402263 756 ntBASIC2.58□□□□□ -2
APOEP02649 RPS4XP7-201ENST00000406274 780 ntBASIC2.58□□□□□ -2
APOEP02649 AC092745.2-202ENST00000411880 369 ntBASIC2.58□□□□□ -2
APOEP02649 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.58□□□□□ -2
APOEP02649 MTCO1P57-201ENST00000432182 261 ntBASIC2.58□□□□□ -2
APOEP02649 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.58□□□□□ -2
APOEP02649 MTCYBP34-201ENST00000439552 670 ntBASIC2.58□□□□□ -2
APOEP02649 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.58□□□□□ -2
APOEP02649 CDC42P4-201ENST00000510507 563 ntBASIC2.58□□□□□ -2
APOEP02649 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.58□□□□□ -2
APOEP02649 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.58□□□□□ -2
APOEP02649 AP001646.1-201ENST00000527936 915 ntBASIC2.58□□□□□ -2
APOEP02649 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.58□□□□□ -2
APOEP02649 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.58□□□□□ -2
APOEP02649 MYL12BP1-201ENST00000569826 507 ntBASIC2.58□□□□□ -2
APOEP02649 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.58□□□□□ -2
APOEP02649 AC012254.4-201ENST00000588843 273 ntBASIC2.58□□□□□ -2
APOEP02649 RPL23AP92-201ENST00000603609 255 ntBASIC2.58□□□□□ -2
APOEP02649 MIR6076-201ENST00000617521 113 ntBASIC2.58□□□□□ -2
APOEP02649 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.58□□□□□ -2
APOEP02649 MTND2P41-201ENST00000637599 773 ntBASIC2.58□□□□□ -2
APOEP02649 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.58□□□□□ -2
APOEP02649 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.58□□□□□ -2
APOEP02649 AC135776.4-201ENST00000624300 1904 ntBASIC2.58□□□□□ -2
APOEP02649 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.58□□□□□ -2
APOEP02649 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.57□□□□□ -2
APOEP02649 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
APOEP02649 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
APOEP02649 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
APOEP02649 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
APOEP02649 RNU6-441P-201ENST00000384545 106 ntBASIC2.57□□□□□ -2
APOEP02649 RPS4XP3-201ENST00000398541 413 ntBASIC2.57□□□□□ -2
APOEP02649 AL162578.1-201ENST00000406202 378 ntBASIC2.57□□□□□ -2
APOEP02649 RNU6-712P-201ENST00000410558 100 ntBASIC2.57□□□□□ -2
APOEP02649 AL513477.1-202ENST00000417061 214 ntBASIC2.57□□□□□ -2
APOEP02649 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.57□□□□□ -2
APOEP02649 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.57□□□□□ -2
APOEP02649 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.57□□□□□ -2
APOEP02649 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.57□□□□□ -2
APOEP02649 AL513328.1-201ENST00000446460 224 ntBASIC2.57□□□□□ -2
APOEP02649 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.57□□□□□ -2
APOEP02649 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.57□□□□□ -2
APOEP02649 RPS27P23-201ENST00000487608 251 ntBASIC2.57□□□□□ -2
APOEP02649 RAC1P5-201ENST00000512182 576 ntBASIC2.57□□□□□ -2
APOEP02649 RNA5SP402-201ENST00000517148 110 ntBASIC2.57□□□□□ -2
APOEP02649 AC024224.1-201ENST00000538284 609 ntBASIC2.57□□□□□ -2
APOEP02649 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.57□□□□□ -2
APOEP02649 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.57□□□□□ -2
APOEP02649 STMN1P1-201ENST00000617809 440 ntBASIC2.57□□□□□ -2
APOEP02649 AC024595.1-201ENST00000623088 387 ntBASIC2.57□□□□□ -2
APOEP02649 AC068620.4-201ENST00000636730 1182 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms