Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.38□□□□□ -1.87
PDGFBP01127 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDGFBP01127 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PDGFBP01127 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PDGFBP01127 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFBP01127 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFBP01127 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PDGFBP01127 Y_RNA.465-201ENST00000384293 102 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AL590084.1-201ENST00000407885 387 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 U3.39-201ENST00000408569 239 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 RPS15AP38-201ENST00000413110 372 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AC109780.2-201ENST00000413467 845 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFBP01127 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFBP01127 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFBP01127 AC233728.2-201ENST00000425348 757 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 PSMA6P3-201ENST00000428242 164 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 ATP5F1P1-201ENST00000433775 569 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AF228730.2-201ENST00000438784 848 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PDGFBP01127 TPTE2P3-201ENST00000441562 1189 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AL591719.1-201ENST00000444669 744 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 RPS29P31-201ENST00000446147 164 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.37□□□□□ -1.87
PDGFBP01127 AC007327.1-201ENST00000447461 264 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 RPL12P26-201ENST00000452430 487 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFBP01127 Z82190.1-201ENST00000454534 490 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.37□□□□□ -1.87
PDGFBP01127 AC011979.1-201ENST00000472300 483 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.37□□□□□ -1.87
PDGFBP01127 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFBP01127 APOOP4-201ENST00000513530 597 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFBP01127 AC091826.1-201ENST00000514065 313 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.37□□□□□ -1.87
PDGFBP01127 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.37□□□□□ -1.87
PDGFBP01127 HIGD1AP1-201ENST00000550979 275 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 SETP7-201ENST00000552169 453 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.37□□□□□ -1.87
PDGFBP01127 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.37□□□□□ -1.87
PDGFBP01127 AC245036.5-201ENST00000596330 847 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AC091057.2-201ENST00000602594 792 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 MRPS35P3-201ENST00000603189 709 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 DUXAP3-201ENST00000603616 594 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AC131235.4-201ENST00000609288 620 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 AL353748.2-201ENST00000622148 471 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PDGFBP01127 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.37□□□□□ -1.87
PDGFBP01127 AC107982.1-201ENST00000507171 1300 ntBASIC3.37□□□□□ -1.87
PDGFBP01127 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFBP01127 ZNF876P-202ENST00000398732 1485 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFBP01127 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFBP01127 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFBP01127 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFBP01127 RNU4-82P-201ENST00000362443 140 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 RNU6-1155P-201ENST00000363554 107 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 ANAPC10P1-201ENST00000395991 556 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 ERHP2-201ENST00000402323 299 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFBP01127 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.36□□□□□ -1.87
PDGFBP01127 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.36□□□□□ -1.87
PDGFBP01127 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.36□□□□□ -1.87
PDGFBP01127 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.36□□□□□ -1.87
PDGFBP01127 RN7SL594P-201ENST00000470590 287 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 AC084357.1-201ENST00000473404 255 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.36□□□□□ -1.87
PDGFBP01127 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.36□□□□□ -1.87
PDGFBP01127 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.36□□□□□ -1.87
PDGFBP01127 AC009812.2-201ENST00000517657 457 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 IGHV3-76-201ENST00000522465 295 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 ERHP1-201ENST00000523006 310 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.36□□□□□ -1.87
PDGFBP01127 COX6CP3-201ENST00000580869 223 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 NRBF2P5-201ENST00000603087 788 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 AC073657.2-201ENST00000605661 303 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 BRDTP1-201ENST00000605735 677 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 AC087683.2-201ENST00000611384 326 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 MIR486-1-201ENST00000612171 68 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 U7.8-201ENST00000619968 63 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 AP003485.2-201ENST00000623636 610 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 AC116618.1-201ENST00000634617 774 ntBASIC3.36□□□□□ -1.87
PDGFBP01127 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDGFBP01127 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PDGFBP01127 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDGFBP01127 ZNF826P-207ENST00000622273 1910 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDGFBP01127 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.35□□□□□ -1.87
PDGFBP01127 RNU6-216P-201ENST00000363282 104 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 AL445529.1-201ENST00000398713 389 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.35□□□□□ -1.87
PDGFBP01127 RPL7P30-201ENST00000420888 709 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 AC019178.2-201ENST00000423595 505 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 MTCO1P39-201ENST00000426148 480 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 AC079780.1-201ENST00000428259 207 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 AL365396.1-201ENST00000430854 671 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 EZH2P1-201ENST00000431167 291 ntBASIC3.35□□□□□ -1.87
PDGFBP01127 MUPP-201ENST00000438111 566 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms