Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL159169.3-201ENST00000608871 561 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC107294.3-201ENST00000609211 526 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC012360.2-201ENST00000609349 391 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC024941.1-201ENST00000612250 334 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC009878.1-201ENST00000621819 340 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 MIR6500-201ENST00000622700 86 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC092656.1-203ENST00000624134 423 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.44□□□□□ -1.86
CLPTM1O96005 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.44□□□□□ -1.86
CLPTM1O96005 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLPTM1O96005 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLPTM1O96005 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CLPTM1O96005 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.44□□□□□ -1.86
CLPTM1O96005 GDI2P1-201ENST00000429312 1336 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLPTM1O96005 AC011978.2-201ENST00000569835 2054 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
CLPTM1O96005 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLPTM1O96005 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CLPTM1O96005 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLPTM1O96005 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLPTM1O96005 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLPTM1O96005 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLPTM1O96005 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
CLPTM1O96005 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CLPTM1O96005 RNU6-623P-201ENST00000363143 105 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.43□□□□□ -1.86
CLPTM1O96005 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.43□□□□□ -1.86
CLPTM1O96005 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.43□□□□□ -1.86
CLPTM1O96005 RPL31P1-201ENST00000398116 372 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 AL355379.1-201ENST00000405542 640 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 AL138880.1-201ENST00000405824 642 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 AL356967.1-201ENST00000406305 431 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 TPMTP2-201ENST00000414372 726 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.43□□□□□ -1.86
CLPTM1O96005 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.43□□□□□ -1.86
CLPTM1O96005 OR8F1P-201ENST00000425243 930 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.43□□□□□ -1.86
CLPTM1O96005 AP000907.1-201ENST00000428428 510 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 OR51AB1P-201ENST00000429046 620 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 PSMA2P3-201ENST00000429685 675 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.43□□□□□ -1.86
CLPTM1O96005 NDUFB1P1-201ENST00000435191 180 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 FTH1P1-201ENST00000437933 532 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 MTND5P14-201ENST00000441481 1267 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 BMI1P1-201ENST00000445879 941 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 COX6CP12-201ENST00000446748 202 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 MTCO1P27-201ENST00000448269 226 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 RNU6-956P-201ENST00000458868 103 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CLPTM1O96005 HMGB1P36-201ENST00000487709 576 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 AC093809.1-201ENST00000509155 340 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 MTND3P5-201ENST00000512798 333 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.43□□□□□ -1.86
CLPTM1O96005 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
CLPTM1O96005 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.43□□□□□ -1.86
CLPTM1O96005 AC087369.1-201ENST00000520775 996 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.43□□□□□ -1.86
CLPTM1O96005 AC013828.2-201ENST00000532487 235 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 TRAV37-201ENST00000553906 342 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.43□□□□□ -1.86
CLPTM1O96005 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.43□□□□□ -1.86
CLPTM1O96005 MIR5186-201ENST00000577504 120 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.43□□□□□ -1.86
CLPTM1O96005 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.43□□□□□ -1.86
CLPTM1O96005 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.43□□□□□ -1.86
CLPTM1O96005 AL606490.9-201ENST00000603331 271 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 AC112230.1-201ENST00000604342 547 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.43□□□□□ -1.86
CLPTM1O96005 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.43□□□□□ -1.86
CLPTM1O96005 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.43□□□□□ -1.86
CLPTM1O96005 CYP3A51P-201ENST00000633513 256 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 AL732372.2-225ENST00000642124 456 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLPTM1O96005 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.43□□□□□ -1.86
CLPTM1O96005 AC004972.1-201ENST00000623934 2209 ntBASIC3.43□□□□□ -1.86
CLPTM1O96005 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLPTM1O96005 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.43□□□□□ -1.86
CLPTM1O96005 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.43□□□□□ -1.86
CLPTM1O96005 MAPK10-362ENST00000641864 4484 ntBASIC3.42□□□□□ -1.86
CLPTM1O96005 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLPTM1O96005 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLPTM1O96005 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.42□□□□□ -1.86
CLPTM1O96005 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLPTM1O96005 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLPTM1O96005 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLPTM1O96005 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLPTM1O96005 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLPTM1O96005 RPL23AP57-201ENST00000332361 466 ntBASIC3.42□□□□□ -1.86
CLPTM1O96005 Y_RNA.97-201ENST00000363094 102 ntBASIC3.42□□□□□ -1.86
CLPTM1O96005 RNA5SP42-201ENST00000364278 115 ntBASIC3.42□□□□□ -1.86
CLPTM1O96005 RNU6-343P-201ENST00000364709 104 ntBASIC3.42□□□□□ -1.86
CLPTM1O96005 SNORD82-201ENST00000365530 70 ntBASIC3.42□□□□□ -1.86
CLPTM1O96005 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CLPTM1O96005 MIR199A2-201ENST00000385289 110 ntBASIC3.42□□□□□ -1.86
CLPTM1O96005 SNORA57.1-201ENST00000391227 145 ntBASIC3.42□□□□□ -1.86
CLPTM1O96005 RNU2-71P-201ENST00000411395 189 ntBASIC3.42□□□□□ -1.86
CLPTM1O96005 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.42□□□□□ -1.86
CLPTM1O96005 AC093578.1-201ENST00000415219 368 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms