Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
GGPS1O95749 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.72□□□□□ -1.81
GGPS1O95749 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.72□□□□□ -1.81
GGPS1O95749 AC090615.1-201ENST00000577519 154 ntBASIC3.72□□□□□ -1.81
GGPS1O95749 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.72□□□□□ -1.81
GGPS1O95749 DUXAP11-201ENST00000603858 526 ntBASIC3.72□□□□□ -1.81
GGPS1O95749 AC011468.4-201ENST00000603942 409 ntBASIC3.72□□□□□ -1.81
GGPS1O95749 AP001330.4-201ENST00000604350 154 ntBASIC3.72□□□□□ -1.81
GGPS1O95749 AL592221.1-201ENST00000605266 382 ntBASIC3.72□□□□□ -1.81
GGPS1O95749 VIS1.1-201ENST00000610517 203 ntBASIC3.72□□□□□ -1.81
GGPS1O95749 AP000484.1-201ENST00000620067 1252 ntBASIC3.72□□□□□ -1.81
GGPS1O95749 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.72□□□□□ -1.81
GGPS1O95749 MTND4P34-201ENST00000572715 1371 ntBASIC3.72□□□□□ -1.81
GGPS1O95749 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
GGPS1O95749 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
GGPS1O95749 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
GGPS1O95749 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.72□□□□□ -1.81
GGPS1O95749 SGO1P2-201ENST00000429458 1589 ntBASIC3.72□□□□□ -1.81
GGPS1O95749 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.71□□□□□ -1.82
GGPS1O95749 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GGPS1O95749 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
GGPS1O95749 RNU6-343P-201ENST00000364709 104 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 SNORA48.5-201ENST00000391143 135 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 AC096664.2-201ENST00000411843 406 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 USP9YP33-201ENST00000412220 421 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 AC126124.2-201ENST00000413542 321 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 AL159169.1-201ENST00000421119 127 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.71□□□□□ -1.82
GGPS1O95749 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.71□□□□□ -1.82
GGPS1O95749 USP9YP35-201ENST00000435696 412 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 Z80107.1-201ENST00000436830 412 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GGPS1O95749 ATP5C1P1-201ENST00000441945 895 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 BX322784.1-201ENST00000455793 1077 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 RPL23AP31-201ENST00000456160 467 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 RPS4XP2-201ENST00000458402 793 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.71□□□□□ -1.82
GGPS1O95749 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.71□□□□□ -1.82
GGPS1O95749 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.71□□□□□ -1.82
GGPS1O95749 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.71□□□□□ -1.82
GGPS1O95749 AC093677.1-201ENST00000514414 678 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 AC110760.3-202ENST00000515177 371 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.71□□□□□ -1.82
GGPS1O95749 SNORA31.8-201ENST00000516327 108 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.71□□□□□ -1.82
GGPS1O95749 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.71□□□□□ -1.82
GGPS1O95749 AC015917.1-201ENST00000579654 510 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.71□□□□□ -1.82
GGPS1O95749 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.71□□□□□ -1.82
GGPS1O95749 VN1R92P-201ENST00000598511 928 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.71□□□□□ -1.82
GGPS1O95749 AL158042.1-201ENST00000605338 460 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.71□□□□□ -1.82
GGPS1O95749 AC092106.3-201ENST00000611308 722 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
GGPS1O95749 AC026422.1-201ENST00000623961 452 ntBASIC3.71□□□□□ -1.82
GGPS1O95749 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.71□□□□□ -1.82
GGPS1O95749 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GGPS1O95749 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GGPS1O95749 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.71□□□□□ -1.82
GGPS1O95749 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
GGPS1O95749 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.71□□□□□ -1.82
GGPS1O95749 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
GGPS1O95749 RNU1-70P-201ENST00000362618 164 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GGPS1O95749 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GGPS1O95749 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
GGPS1O95749 SKINT1L-201ENST00000401057 817 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 RNA5SP31-201ENST00000411144 127 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.7□□□□□ -1.82
GGPS1O95749 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 AL353678.1-201ENST00000422735 741 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 BX679664.1-201ENST00000434429 253 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.7□□□□□ -1.82
GGPS1O95749 MTCYBP31-201ENST00000438855 1122 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.7□□□□□ -1.82
GGPS1O95749 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.7□□□□□ -1.82
GGPS1O95749 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.7□□□□□ -1.82
GGPS1O95749 RPL23AP67-201ENST00000465341 474 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.7□□□□□ -1.82
GGPS1O95749 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.7□□□□□ -1.82
GGPS1O95749 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.7□□□□□ -1.82
GGPS1O95749 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 COX6CP8-201ENST00000522620 226 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GGPS1O95749 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GGPS1O95749 AC023050.2-201ENST00000544968 387 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.7□□□□□ -1.82
GGPS1O95749 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.7□□□□□ -1.82
GGPS1O95749 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.7□□□□□ -1.82
GGPS1O95749 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.7□□□□□ -1.82
GGPS1O95749 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.7□□□□□ -1.82
GGPS1O95749 AC087465.1-201ENST00000560574 245 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.7□□□□□ -1.82
GGPS1O95749 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.7□□□□□ -1.82
GGPS1O95749 VN1R82P-201ENST00000601481 356 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 AC112220.3-201ENST00000605502 502 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 AC018816.2-201ENST00000621460 353 ntBASIC3.7□□□□□ -1.82
GGPS1O95749 AC095031.1-201ENST00000623685 672 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms