Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 MIR181A2-201ENST00000384863 110 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 UBE2D3P2-201ENST00000424409 445 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 MTCYBP32-201ENST00000427945 1084 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 AL139132.1-201ENST00000431587 344 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.69□□□□□ -1.98
SEMA3DO95025 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SEMA3DO95025 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.69□□□□□ -1.98
SEMA3DO95025 COX6CP18-201ENST00000448769 222 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 RPL23AP11-201ENST00000475260 469 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 RPL30P14-201ENST00000482744 348 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.69□□□□□ -1.98
SEMA3DO95025 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.69□□□□□ -1.98
SEMA3DO95025 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.69□□□□□ -1.98
SEMA3DO95025 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SEMA3DO95025 AC010374.2-201ENST00000512933 535 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.69□□□□□ -1.98
SEMA3DO95025 MTCO3P27-201ENST00000514397 196 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 MTND5P4-201ENST00000514978 288 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 RPPH1-2P-201ENST00000516688 293 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 AP003355.1-201ENST00000518956 587 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.69□□□□□ -1.98
SEMA3DO95025 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.69□□□□□ -1.98
SEMA3DO95025 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.69□□□□□ -1.98
SEMA3DO95025 AC090330.1-201ENST00000588646 764 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 DPRXP5-201ENST00000604662 539 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 AP000238.1-201ENST00000608759 426 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 AP005137.2-201ENST00000609238 400 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SEMA3DO95025 AC093875.1-201ENST00000623688 504 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 AC103798.2-201ENST00000624292 632 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.69□□□□□ -1.98
SEMA3DO95025 AC092593.1-201ENST00000515413 1815 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.69□□□□□ -1.98
SEMA3DO95025 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SEMA3DO95025 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SEMA3DO95025 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SEMA3DO95025 OR5H2-201ENST00000355273 945 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 NACA3P-201ENST00000359690 648 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 MIR208A-201ENST00000362287 71 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 SNORD82-201ENST00000365530 70 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SEMA3DO95025 AL139095.1-201ENST00000404326 391 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 FAT1P1-201ENST00000406588 507 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AL133264.1-201ENST00000407157 562 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.68□□□□□ -1.98
SEMA3DO95025 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.68□□□□□ -1.98
SEMA3DO95025 AL513477.1-202ENST00000417061 214 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.68□□□□□ -1.98
SEMA3DO95025 AC027644.1-201ENST00000419595 298 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AL137014.1-201ENST00000420490 1226 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.68□□□□□ -1.98
SEMA3DO95025 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AC006946.1-201ENST00000429106 328 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 MTCYBP15-201ENST00000433123 1127 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 RPS20P5-201ENST00000434808 360 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 RPL36AP6-201ENST00000435770 321 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AC004022.1-201ENST00000447766 1066 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 TRBV26-201ENST00000456572 344 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 MTCO3P2-201ENST00000457365 171 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AC003982.1-202ENST00000469928 248 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AC103975.1-201ENST00000482506 483 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 RN7SL297P-201ENST00000483161 293 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.68□□□□□ -1.98
SEMA3DO95025 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.68□□□□□ -1.98
SEMA3DO95025 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.68□□□□□ -1.98
SEMA3DO95025 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.68□□□□□ -1.98
SEMA3DO95025 ZNF705CP-201ENST00000530515 889 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.68□□□□□ -1.98
SEMA3DO95025 AC023825.1-201ENST00000566704 1030 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.68□□□□□ -1.98
SEMA3DO95025 RPL12P50-201ENST00000603116 116 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AC009570.1-201ENST00000609599 745 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AC006329.2-201ENST00000611491 394 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 ATP5A1P2-202ENST00000616464 443 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AC040168.1-201ENST00000623594 991 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 AC095031.1-201ENST00000623685 672 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SEMA3DO95025 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SEMA3DO95025 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.68□□□□□ -1.98
SEMA3DO95025 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.68□□□□□ -1.98
SEMA3DO95025 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SEMA3DO95025 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SEMA3DO95025 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SEMA3DO95025 AL672167.1-206ENST00000356293 943 ntBASIC2.67□□□□□ -1.98
SEMA3DO95025 RNU6-251P-201ENST00000363235 104 ntBASIC2.67□□□□□ -1.98
SEMA3DO95025 RNU6-839P-201ENST00000363347 108 ntBASIC2.67□□□□□ -1.98
SEMA3DO95025 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.67□□□□□ -1.98
SEMA3DO95025 UBA52P6-201ENST00000399822 382 ntBASIC2.67□□□□□ -1.98
SEMA3DO95025 AL603865.2-201ENST00000401679 213 ntBASIC2.67□□□□□ -1.98
SEMA3DO95025 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.67□□□□□ -1.98
SEMA3DO95025 EEF1A1P41-201ENST00000414667 207 ntBASIC2.67□□□□□ -1.98
SEMA3DO95025 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.67□□□□□ -1.98
SEMA3DO95025 RPL23AP16-201ENST00000441715 421 ntBASIC2.67□□□□□ -1.98
SEMA3DO95025 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.67□□□□□ -1.98
SEMA3DO95025 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.67□□□□□ -1.98
SEMA3DO95025 AL590664.1-201ENST00000448065 339 ntBASIC2.67□□□□□ -1.98
SEMA3DO95025 NANOGNBP1-201ENST00000448444 480 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms