Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP4O75379 AL356489.2-201ENST00000566968 3528 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP4O75379 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.29□□□□□ -1.56
VAMP4O75379 MTND5P33-201ENST00000571250 1450 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP4O75379 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VAMP4O75379 RNU1-108P-201ENST00000362556 161 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 RNU6-451P-201ENST00000362921 107 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 RNU6-1293P-201ENST00000384077 107 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 RNU6-456P-201ENST00000384493 107 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 AL356421.1-201ENST00000403255 413 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.29□□□□□ -1.56
VAMP4O75379 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.29□□□□□ -1.56
VAMP4O75379 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.29□□□□□ -1.56
VAMP4O75379 SDCBPP3-201ENST00000419629 891 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 AC004975.1-201ENST00000428733 208 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.29□□□□□ -1.56
VAMP4O75379 RPL23AP46-201ENST00000438548 490 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 AL049734.2-201ENST00000441066 616 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.29□□□□□ -1.56
VAMP4O75379 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.29□□□□□ -1.56
VAMP4O75379 RNU6-261P-201ENST00000459506 102 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 MTCO2P29-201ENST00000465212 189 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 RN7SL604P-201ENST00000492589 296 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.29□□□□□ -1.56
VAMP4O75379 FGF7P4-201ENST00000509595 295 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 AC010486.1-201ENST00000511793 424 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.29□□□□□ -1.56
VAMP4O75379 RNU7-143P-201ENST00000516781 65 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 RNU6-835P-201ENST00000516974 104 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP4O75379 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.29□□□□□ -1.56
VAMP4O75379 DYNLL1P4-201ENST00000549314 266 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 MIR4504-201ENST00000577413 92 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 MIR4716-201ENST00000579628 84 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.29□□□□□ -1.56
VAMP4O75379 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.29□□□□□ -1.56
VAMP4O75379 RNU6-156P-201ENST00000621869 107 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 MIR7702-201ENST00000621931 59 ntBASIC5.29□□□□□ -1.56
VAMP4O75379 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.29□□□□□ -1.56
VAMP4O75379 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP4O75379 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP4O75379 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
VAMP4O75379 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP4O75379 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VAMP4O75379 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.29□□□□□ -1.56
VAMP4O75379 AC011978.2-201ENST00000569835 2054 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
VAMP4O75379 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.28□□□□□ -1.56
VAMP4O75379 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VAMP4O75379 Y_RNA.86-201ENST00000363020 111 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 Y_RNA.142-201ENST00000363491 102 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 RNU6-1097P-201ENST00000363586 107 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 RNU6-108P-201ENST00000365558 107 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 SNORA20.2-201ENST00000383922 131 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 RNU6-1226P-201ENST00000384317 107 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 RNU1-13P-201ENST00000384499 162 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 ENSAP1-201ENST00000392855 326 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 AL022722.2-201ENST00000402519 180 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.28□□□□□ -1.56
VAMP4O75379 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.28□□□□□ -1.56
VAMP4O75379 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.28□□□□□ -1.56
VAMP4O75379 AC008850.1-201ENST00000427546 362 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 AL590233.1-201ENST00000430017 456 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 AC104073.1-201ENST00000451988 151 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 RN7SL585P-201ENST00000470538 280 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 RPL23AP41-201ENST00000484754 458 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 AC006499.6-201ENST00000511169 607 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 NPM1P41-201ENST00000512920 831 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.28□□□□□ -1.56
VAMP4O75379 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.28□□□□□ -1.56
VAMP4O75379 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VAMP4O75379 OR8L1P-201ENST00000534005 955 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.28□□□□□ -1.56
VAMP4O75379 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.28□□□□□ -1.56
VAMP4O75379 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.28□□□□□ -1.56
VAMP4O75379 RPL23AP87-202ENST00000573039 466 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 AC110743.1-201ENST00000584870 478 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 AL136363.1-201ENST00000605349 337 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.28□□□□□ -1.56
VAMP4O75379 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.28□□□□□ -1.56
VAMP4O75379 AC064836.2-201ENST00000609491 462 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 AL355472.4-201ENST00000610233 626 ntBASIC5.28□□□□□ -1.56
VAMP4O75379 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VAMP4O75379 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.28□□□□□ -1.56
VAMP4O75379 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VAMP4O75379 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
VAMP4O75379 AL592437.2-201ENST00000421655 2434 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VAMP4O75379 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VAMP4O75379 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
VAMP4O75379 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
VAMP4O75379 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
VAMP4O75379 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VAMP4O75379 RNU4-73P-201ENST00000363164 141 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 RNU6-169P-201ENST00000365336 107 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 RPS26P8-201ENST00000393490 348 ntBASIC5.27□□□□□ -1.57
VAMP4O75379 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.27□□□□□ -1.57
VAMP4O75379 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms