Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM13O60858 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM13O60858 RPS17P8-201ENST00000434525 335 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 AL138799.3-201ENST00000438968 350 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 AC126389.1-201ENST00000477436 290 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 AC034222.1-201ENST00000494052 532 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM13O60858 AC011411.1-201ENST00000509592 876 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM13O60858 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM13O60858 RNU6-566P-201ENST00000516790 107 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 RNA5SP337-201ENST00000517007 109 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 AC087854.1-201ENST00000519706 414 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM13O60858 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM13O60858 HSPE1P3-201ENST00000559254 309 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 MIR4790-201ENST00000577799 79 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM13O60858 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM13O60858 AC018889.1-201ENST00000605372 397 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM13O60858 AL627230.1-201ENST00000613077 211 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM13O60858 AL591926.8-201ENST00000616876 211 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 OR52H1-202ENST00000641796 1061 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.72□□□□□ -1.65
TRIM13O60858 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM13O60858 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM13O60858 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM13O60858 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM13O60858 AP001273.1-201ENST00000624493 3152 ntBASIC4.71□□□□□ -1.65
TRIM13O60858 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.65
TRIM13O60858 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TRIM13O60858 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.71□□□□□ -1.65
TRIM13O60858 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM13O60858 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TRIM13O60858 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM13O60858 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM13O60858 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM13O60858 Y_RNA.252-201ENST00000364556 101 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 Y_RNA.367-201ENST00000365544 101 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM13O60858 Y_RNA.447-201ENST00000384184 113 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 RNU6-310P-201ENST00000384655 107 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 SOD2P1-201ENST00000396543 562 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 RPL7P60-201ENST00000397636 735 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 DHFRP6-201ENST00000401776 268 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 RPL6P29-201ENST00000414863 865 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 AL356968.1-201ENST00000416622 474 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 DPH3P2-201ENST00000422618 250 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM13O60858 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.71□□□□□ -1.66
TRIM13O60858 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM13O60858 RPL7L1P1-201ENST00000448259 785 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 RPL7P52-201ENST00000449200 742 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 RPS20P32-201ENST00000456044 356 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM13O60858 MTCO3P2-201ENST00000457365 171 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 RPL23AP11-201ENST00000475260 469 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 RN7SL319P-201ENST00000480656 221 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 DEFB109F-201ENST00000491870 277 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 RPL22P13-201ENST00000493291 347 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 SNRPCP2-201ENST00000504370 475 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 RN7SKP219-201ENST00000516825 296 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 RNA5SP392-201ENST00000516905 112 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM13O60858 HAUS8P1-201ENST00000549005 542 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM13O60858 AC093249.4-201ENST00000564755 259 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 ATP5J2P6-201ENST00000565203 266 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 AL356432.3-201ENST00000568952 465 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM13O60858 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM13O60858 AC015982.1-201ENST00000608113 465 ntBASIC4.71□□□□□ -1.66
TRIM13O60858 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM13O60858 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TRIM13O60858 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM13O60858 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
TRIM13O60858 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM13O60858 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM13O60858 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.71□□□□□ -1.66
TRIM13O60858 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
TRIM13O60858 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM13O60858 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM13O60858 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM13O60858 MTND5P30-201ENST00000452896 1731 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 TLK1P1-201ENST00000456760 2440 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 RN7SKP160-201ENST00000363804 340 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 RNU1-85P-201ENST00000364127 164 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 RNY4P16-201ENST00000364768 94 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 RNA5SP428-201ENST00000365129 132 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 RNA5SP455-201ENST00000365190 119 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 RNU6-744P-201ENST00000365557 107 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 RNU6-1316P-201ENST00000384242 108 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 RNU6-921P-201ENST00000384361 107 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 Y_RNA.482-201ENST00000384377 111 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 RNY1P14-201ENST00000384426 108 ntBASIC4.7□□□□□ -1.66
TRIM13O60858 SNORA70-201ENST00000384436 135 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms