Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKNO60260 CBX3P5-201ENST00000552017 521 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKNO60260 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.44□□□□□ -1.86
PRKNO60260 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.44□□□□□ -1.86
PRKNO60260 TPMTP1-201ENST00000592307 737 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKNO60260 AC091805.2-201ENST00000603848 235 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AP003117.2-201ENST00000606010 545 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKNO60260 AC105429.2-201ENST00000610567 517 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AC008498.1-201ENST00000613012 531 ntBASIC3.44□□□□□ -1.86
PRKNO60260 AC104010.1-201ENST00000616889 150 ntBASIC3.44□□□□□ -1.86
PRKNO60260 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.44□□□□□ -1.86
PRKNO60260 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKNO60260 AL603839.4-201ENST00000624658 1005 ntBASIC3.44□□□□□ -1.86
PRKNO60260 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.44□□□□□ -1.86
PRKNO60260 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PRKNO60260 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKNO60260 AC097714.1-201ENST00000511272 1647 ntBASIC3.44□□□□□ -1.86
PRKNO60260 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PRKNO60260 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.44□□□□□ -1.86
PRKNO60260 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRKNO60260 ZNF734P-201ENST00000419494 1534 ntBASIC3.44□□□□□ -1.86
PRKNO60260 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.44□□□□□ -1.86
PRKNO60260 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKNO60260 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
PRKNO60260 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
PRKNO60260 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKNO60260 ZNF33CP-201ENST00000432492 2030 ntBASIC3.43□□□□□ -1.86
PRKNO60260 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
PRKNO60260 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.43□□□□□ -1.86
PRKNO60260 Y_RNA.3-201ENST00000362331 103 ntBASIC3.43□□□□□ -1.86
PRKNO60260 RNU6-853P-201ENST00000364306 107 ntBASIC3.43□□□□□ -1.86
PRKNO60260 RNA5SP424-201ENST00000390988 115 ntBASIC3.43□□□□□ -1.86
PRKNO60260 Y_RNA.598-201ENST00000410480 95 ntBASIC3.43□□□□□ -1.86
PRKNO60260 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKNO60260 AF274854.1-201ENST00000413236 615 ntBASIC3.43□□□□□ -1.86
PRKNO60260 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.43□□□□□ -1.86
PRKNO60260 USP9YP13-201ENST00000417797 480 ntBASIC3.43□□□□□ -1.86
PRKNO60260 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.43□□□□□ -1.86
PRKNO60260 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.43□□□□□ -1.86
PRKNO60260 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKNO60260 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.43□□□□□ -1.86
PRKNO60260 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKNO60260 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.43□□□□□ -1.86
PRKNO60260 SKP1P1-201ENST00000438081 489 ntBASIC3.43□□□□□ -1.86
PRKNO60260 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKNO60260 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKNO60260 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKNO60260 Z82190.1-201ENST00000454534 490 ntBASIC3.43□□□□□ -1.86
PRKNO60260 AP001992.1-205ENST00000462248 379 ntBASIC3.43□□□□□ -1.86
PRKNO60260 AP002812.1-201ENST00000495378 474 ntBASIC3.43□□□□□ -1.86
PRKNO60260 OR5H5P-201ENST00000503164 928 ntBASIC3.43□□□□□ -1.86
PRKNO60260 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKNO60260 AC104619.4-201ENST00000510773 249 ntBASIC3.43□□□□□ -1.86
PRKNO60260 AC093677.1-201ENST00000514414 678 ntBASIC3.43□□□□□ -1.86
PRKNO60260 RNU6-720P-201ENST00000516363 108 ntBASIC3.43□□□□□ -1.86
PRKNO60260 SNORA70.18-201ENST00000516696 98 ntBASIC3.43□□□□□ -1.86
PRKNO60260 PAICSP4-201ENST00000517543 1253 ntBASIC3.43□□□□□ -1.86
PRKNO60260 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKNO60260 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.43□□□□□ -1.86
PRKNO60260 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKNO60260 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.43□□□□□ -1.86
PRKNO60260 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.43□□□□□ -1.86
PRKNO60260 MIR4528-201ENST00000577763 90 ntBASIC3.43□□□□□ -1.86
PRKNO60260 MIR4644-201ENST00000579929 84 ntBASIC3.43□□□□□ -1.86
PRKNO60260 BNIP3P8-201ENST00000597863 560 ntBASIC3.43□□□□□ -1.86
PRKNO60260 AL136363.2-201ENST00000604173 851 ntBASIC3.43□□□□□ -1.86
PRKNO60260 AC112191.3-201ENST00000604371 277 ntBASIC3.43□□□□□ -1.86
PRKNO60260 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.43□□□□□ -1.86
PRKNO60260 AC098614.4-201ENST00000607601 462 ntBASIC3.43□□□□□ -1.86
PRKNO60260 AL359740.1-201ENST00000624340 592 ntBASIC3.43□□□□□ -1.86
PRKNO60260 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.43□□□□□ -1.86
PRKNO60260 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.43□□□□□ -1.86
PRKNO60260 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.43□□□□□ -1.86
PRKNO60260 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PRKNO60260 AL049780.3-201ENST00000624612 1583 ntBASIC3.42□□□□□ -1.86
PRKNO60260 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.42□□□□□ -1.86
PRKNO60260 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.42□□□□□ -1.86
PRKNO60260 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.42□□□□□ -1.86
PRKNO60260 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PRKNO60260 AL161781.1-201ENST00000354277 403 ntBASIC3.42□□□□□ -1.86
PRKNO60260 RNU6-297P-201ENST00000384636 107 ntBASIC3.42□□□□□ -1.86
PRKNO60260 MT-TC-201ENST00000387405 66 ntBASIC3.42□□□□□ -1.86
PRKNO60260 MIR670-201ENST00000390142 98 ntBASIC3.42□□□□□ -1.86
PRKNO60260 RNU6-648P-201ENST00000410190 107 ntBASIC3.42□□□□□ -1.86
PRKNO60260 RNU2-66P-201ENST00000410650 161 ntBASIC3.42□□□□□ -1.86
PRKNO60260 RNU2-15P-201ENST00000410692 191 ntBASIC3.42□□□□□ -1.86
PRKNO60260 AIMP1P1-201ENST00000418670 937 ntBASIC3.42□□□□□ -1.86
PRKNO60260 DBIP2-201ENST00000419076 262 ntBASIC3.42□□□□□ -1.86
PRKNO60260 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.42□□□□□ -1.86
PRKNO60260 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.42□□□□□ -1.86
PRKNO60260 AC091286.1-201ENST00000431233 461 ntBASIC3.42□□□□□ -1.86
PRKNO60260 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRKNO60260 AL356535.1-201ENST00000440335 398 ntBASIC3.42□□□□□ -1.86
PRKNO60260 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.42□□□□□ -1.86
PRKNO60260 RPL7P52-201ENST00000449200 742 ntBASIC3.42□□□□□ -1.86
PRKNO60260 AC006480.1-201ENST00000449887 378 ntBASIC3.42□□□□□ -1.86
PRKNO60260 AL451050.1-201ENST00000450126 415 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms