Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL162389.1-201ENST00000449233 177 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 RPS11P1-201ENST00000451072 473 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 RPL36AP13-201ENST00000457490 317 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 RN7SL585P-201ENST00000470538 280 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 S100A11P1-201ENST00000477525 312 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PHGDHO43175 AC111000.3-201ENST00000508057 576 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.21□□□□□ -1.74
PHGDHO43175 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PHGDHO43175 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.21□□□□□ -1.74
PHGDHO43175 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.21□□□□□ -1.74
PHGDHO43175 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.21□□□□□ -1.74
PHGDHO43175 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.21□□□□□ -1.74
PHGDHO43175 AC012182.1-201ENST00000570133 895 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.21□□□□□ -1.74
PHGDHO43175 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.21□□□□□ -1.74
PHGDHO43175 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHGDHO43175 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHGDHO43175 AL359880.1-201ENST00000621879 266 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PHGDHO43175 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHGDHO43175 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PHGDHO43175 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHGDHO43175 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHGDHO43175 AC012020.1-201ENST00000624541 1728 ntBASIC4.21□□□□□ -1.74
PHGDHO43175 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
PHGDHO43175 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PHGDHO43175 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PHGDHO43175 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
PHGDHO43175 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
PHGDHO43175 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PHGDHO43175 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PHGDHO43175 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PHGDHO43175 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PHGDHO43175 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PHGDHO43175 U3.11-201ENST00000364476 212 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 RNA5SP513-201ENST00000364648 118 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 RNU6-169P-201ENST00000365336 107 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 RNU6-456P-201ENST00000384493 107 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 Y_RNA.554-201ENST00000384672 102 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 RPS4XP9-201ENST00000405151 780 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 RPS16P5-201ENST00000406501 404 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 RN7SKP177-201ENST00000410567 355 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.2□□□□□ -1.74
PHGDHO43175 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.2□□□□□ -1.74
PHGDHO43175 RPL7AP73-201ENST00000413490 353 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 AC069157.1-201ENST00000421749 137 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 MTCYBP5-201ENST00000423752 1135 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 AC068287.1-201ENST00000430283 295 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 RPL23AP89-201ENST00000439324 255 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 AC005094.1-201ENST00000440420 368 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.2□□□□□ -1.74
PHGDHO43175 PHBP16-201ENST00000446318 950 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.2□□□□□ -1.74
PHGDHO43175 AL645939.1-201ENST00000453429 797 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.2□□□□□ -1.74
PHGDHO43175 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PHGDHO43175 RPS29P22-201ENST00000472363 168 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 AC006517.1-201ENST00000480485 328 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.2□□□□□ -1.74
PHGDHO43175 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.2□□□□□ -1.74
PHGDHO43175 MLLT10P2-201ENST00000506434 249 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 AC017037.1-201ENST00000508460 471 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 KLHL2P1-201ENST00000508691 521 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 AC011352.1-201ENST00000512300 793 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 AP001893.2-201ENST00000526949 202 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.2□□□□□ -1.74
PHGDHO43175 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.2□□□□□ -1.74
PHGDHO43175 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.2□□□□□ -1.74
PHGDHO43175 AC092954.2-201ENST00000609103 430 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 TUG1_2.1-201ENST00000614234 87 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 AC008785.1-201ENST00000624475 456 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 AC140479.6-201ENST00000633535 357 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PHGDHO43175 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PHGDHO43175 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PHGDHO43175 AL157700.1-201ENST00000561973 1432 ntBASIC4.2□□□□□ -1.74
PHGDHO43175 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
PHGDHO43175 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
PHGDHO43175 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PHGDHO43175 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.19□□□□□ -1.74
PHGDHO43175 AC012618.3-205ENST00000637896 1496 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.19□□□□□ -1.74
PHGDHO43175 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.19□□□□□ -1.74
PHGDHO43175 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PHGDHO43175 SNORD56.2-201ENST00000363242 71 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PHGDHO43175 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PHGDHO43175 MIR585-201ENST00000384887 94 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 RNA5SP332-201ENST00000391063 115 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PHGDHO43175 RPL21P24-201ENST00000413752 448 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.19□□□□□ -1.74
PHGDHO43175 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.19□□□□□ -1.74
PHGDHO43175 FAR2P4-202ENST00000425399 584 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 AL157831.1-201ENST00000426134 473 ntBASIC4.19□□□□□ -1.74
PHGDHO43175 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.19□□□□□ -1.74
PHGDHO43175 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.19□□□□□ -1.74
PHGDHO43175 AC011998.1-201ENST00000433403 117 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms