Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.93□□□□□ -2.1
CACNA1AO00555 RPL30P6-201ENST00000475925 342 ntBASIC1.93□□□□□ -2.1
CACNA1AO00555 AC108734.3-201ENST00000481241 1165 ntBASIC1.93□□□□□ -2.1
CACNA1AO00555 AC093278.1-201ENST00000494700 600 ntBASIC1.93□□□□□ -2.1
CACNA1AO00555 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.93□□□□□ -2.1
CACNA1AO00555 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.93□□□□□ -2.1
CACNA1AO00555 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.93□□□□□ -2.1
CACNA1AO00555 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.93□□□□□ -2.1
CACNA1AO00555 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.93□□□□□ -2.1
CACNA1AO00555 SNORA7.1-201ENST00000363750 139 ntBASIC1.93□□□□□ -2.1
CACNA1AO00555 AL121834.1-202ENST00000404494 277 ntBASIC1.93□□□□□ -2.1
CACNA1AO00555 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.93□□□□□ -2.1
CACNA1AO00555 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.93□□□□□ -2.1
CACNA1AO00555 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.93□□□□□ -2.1
CACNA1AO00555 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.93□□□□□ -2.1
CACNA1AO00555 RPL21P71-201ENST00000465598 459 ntBASIC1.93□□□□□ -2.1
CACNA1AO00555 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC1.93□□□□□ -2.1
CACNA1AO00555 AC021146.1-201ENST00000511202 716 ntBASIC1.93□□□□□ -2.1
CACNA1AO00555 RNA5SP330-201ENST00000517096 96 ntBASIC1.93□□□□□ -2.1
CACNA1AO00555 AC067805.1-201ENST00000559344 470 ntBASIC1.93□□□□□ -2.1
CACNA1AO00555 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.93□□□□□ -2.1
CACNA1AO00555 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CACNA1AO00555 AC008432.1-201ENST00000615912 1320 ntBASIC1.92□□□□□ -2.1
CACNA1AO00555 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CACNA1AO00555 RNU4-51P-201ENST00000364206 140 ntBASIC1.92□□□□□ -2.1
CACNA1AO00555 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.92□□□□□ -2.1
CACNA1AO00555 AC018630.2-202ENST00000422992 927 ntBASIC1.92□□□□□ -2.1
CACNA1AO00555 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.92□□□□□ -2.1
CACNA1AO00555 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.92□□□□□ -2.1
CACNA1AO00555 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.92□□□□□ -2.1
CACNA1AO00555 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CACNA1AO00555 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.92□□□□□ -2.1
CACNA1AO00555 AC019176.1-201ENST00000518519 225 ntBASIC1.92□□□□□ -2.1
CACNA1AO00555 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC1.92□□□□□ -2.1
CACNA1AO00555 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.92□□□□□ -2.1
CACNA1AO00555 AC025016.1-201ENST00000616746 682 ntBASIC1.92□□□□□ -2.1
CACNA1AO00555 CKAP2P1-201ENST00000555477 2049 ntBASIC1.92□□□□□ -2.1
CACNA1AO00555 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CACNA1AO00555 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CACNA1AO00555 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.92□□□□□ -2.1
CACNA1AO00555 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.92□□□□□ -2.1
CACNA1AO00555 EZH2P1-201ENST00000431167 291 ntBASIC1.92□□□□□ -2.1
CACNA1AO00555 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.92□□□□□ -2.1
CACNA1AO00555 AC004854.1-201ENST00000440356 349 ntBASIC1.92□□□□□ -2.1
CACNA1AO00555 ARL4AP2-201ENST00000507378 601 ntBASIC1.92□□□□□ -2.1
CACNA1AO00555 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.92□□□□□ -2.1
CACNA1AO00555 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.92□□□□□ -2.1
CACNA1AO00555 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CACNA1AO00555 Y_RNA.132-201ENST00000363421 102 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 RNY3-201ENST00000365484 102 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 RNU6-805P-201ENST00000365643 106 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CACNA1AO00555 THAP5P1-201ENST00000439089 262 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 AC009263.1-201ENST00000441193 1239 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 AL121877.1-201ENST00000453704 622 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.91□□□□□ -2.1
CACNA1AO00555 AC084768.2-201ENST00000622736 221 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 MTND5P19-201ENST00000424872 1794 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.91□□□□□ -2.1
CACNA1AO00555 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.91□□□□□ -2.1
CACNA1AO00555 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.91□□□□□ -2.1
CACNA1AO00555 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.91□□□□□ -2.1
CACNA1AO00555 MTND4P35-201ENST00000604257 1375 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 RNU1-93P-201ENST00000364704 169 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 ATG3P1-201ENST00000419507 911 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.91□□□□□ -2.1
CACNA1AO00555 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.91□□□□□ -2.1
CACNA1AO00555 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.91□□□□□ -2.1
CACNA1AO00555 AL390334.1-201ENST00000556395 450 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.91□□□□□ -2.1
CACNA1AO00555 STMN1P1-201ENST00000617809 440 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 AC079298.2-201ENST00000623885 459 ntBASIC1.91□□□□□ -2.1
CACNA1AO00555 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CACNA1AO00555 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CACNA1AO00555 MIR520E-201ENST00000384867 87 ntBASIC1.9□□□□□ -2.1
CACNA1AO00555 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.9□□□□□ -2.1
CACNA1AO00555 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.9□□□□□ -2.1
CACNA1AO00555 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.1
CACNA1AO00555 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.9□□□□□ -2.1
CACNA1AO00555 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CACNA1AO00555 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CACNA1AO00555 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CACNA1AO00555 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CACNA1AO00555 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CACNA1AO00555 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CACNA1AO00555 U3.15-201ENST00000365398 212 ntBASIC1.9□□□□□ -2.11
CACNA1AO00555 RNU1-139P-201ENST00000391307 165 ntBASIC1.9□□□□□ -2.11
CACNA1AO00555 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.9□□□□□ -2.11
CACNA1AO00555 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.9□□□□□ -2.11
CACNA1AO00555 RNU6-250P-201ENST00000516958 103 ntBASIC1.9□□□□□ -2.11
CACNA1AO00555 BX322635.1-201ENST00000605804 496 ntBASIC1.9□□□□□ -2.11
CACNA1AO00555 MIR6788-201ENST00000618842 66 ntBASIC1.9□□□□□ -2.11
CACNA1AO00555 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CACNA1AO00555 RNU6-72P-201ENST00000384285 79 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 HMGB3P23-201ENST00000414981 585 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 LRRC34P2-201ENST00000514850 553 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC1.89□□□□□ -2.11
CACNA1AO00555 OR7K1P-201ENST00000546439 926 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 AC122134.1-201ENST00000565664 1104 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms