Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AC127502.3-201ENST00000636170 1206 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 AC007785.2-201ENST00000598627 1916 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 OR5BR1P-201ENST00000524992 1330 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 MTND5P19-201ENST00000424872 1794 ntBASIC2.36□□□□□ -2.03
SMKR1H3BMG3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SMKR1H3BMG3 ZNF519P1-201ENST00000449011 1626 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AL161781.1-201ENST00000354277 403 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 RNU1-105P-201ENST00000363470 161 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 RNA5SP354-201ENST00000391247 136 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AL445189.1-201ENST00000405722 338 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 TPMTP3-201ENST00000411928 735 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AC245028.1-201ENST00000423259 256 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 OR4C10P-201ENST00000434991 931 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 UBBP3-201ENST00000445497 241 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AC114755.5-201ENST00000447760 831 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AC025518.1-201ENST00000479856 347 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 RPS27P26-201ENST00000494583 239 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AC091163.3-201ENST00000518269 1144 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 COX6CP8-201ENST00000522620 226 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 DEFB131D-201ENST00000526803 184 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 GTF2IP22-201ENST00000554443 182 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AC090888.1-201ENST00000561335 1141 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AL512347.1-201ENST00000566420 503 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AC068135.2-201ENST00000569293 1028 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 RPL23AP84-201ENST00000571193 464 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AC090079.2-201ENST00000575289 768 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.35□□□□□ -2.03
SMKR1H3BMG3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AL603758.1-201ENST00000618654 241 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AL121895.2-201ENST00000619558 447 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 AL356321.1-201ENST00000621360 228 ntBASIC2.35□□□□□ -2.03
SMKR1H3BMG3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 RNU6-97P-201ENST00000363387 104 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 RNU1-32P-201ENST00000363937 159 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 RNU6-1078P-201ENST00000364522 103 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 RNU6-637P-201ENST00000384050 107 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 Y_RNA.472-201ENST00000384322 102 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 SNORD116-12-201ENST00000384468 92 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AL031121.1-201ENST00000406553 254 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 RN7SKP58-201ENST00000411010 305 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 ATP5A1P2-201ENST00000412323 255 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 BMS1P22-201ENST00000414726 313 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC099548.1-201ENST00000421443 426 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 RPL7P37-201ENST00000425095 738 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 USP9YP11-201ENST00000427537 717 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC109583.1-201ENST00000432156 268 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 RPS29P7-201ENST00000439662 171 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 MTND5P14-201ENST00000441481 1267 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 RNF2P1-201ENST00000442955 1010 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AL358794.1-201ENST00000445689 381 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 BMI1P1-201ENST00000445879 941 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 MTND1P9-201ENST00000453775 944 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 RNU7-23P-201ENST00000459465 62 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 MTND4LP3-201ENST00000468320 276 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 HMGN1P11-201ENST00000508668 303 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 APOOP4-201ENST00000513530 597 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 RNA5SP385-201ENST00000515947 110 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AP002748.2-201ENST00000528671 348 ntBASIC2.34□□□□□ -2.03
SMKR1H3BMG3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.34□□□□□ -2.03
SMKR1H3BMG3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms