Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 AC024884.1-201ENST00000620583 399 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 SNORA17.5-201ENST00000630429 132 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF223E7ERA6 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF223E7ERA6 CUL1P1-201ENST00000509510 2425 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 AC138915.4-201ENST00000565549 4147 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF223E7ERA6 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF223E7ERA6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF223E7ERA6 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 AC010329.2-201ENST00000595195 2737 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF223E7ERA6 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF223E7ERA6 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF223E7ERA6 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 RNU6-1180P-201ENST00000364935 107 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 SNORA12.1-201ENST00000390873 148 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 RNA5SP56-201ENST00000410277 118 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 AL513331.1-201ENST00000411908 397 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 AC006461.1-201ENST00000412637 326 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 CHEK2P5-201ENST00000423877 246 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 AIMP1P2-201ENST00000425294 312 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 RPS27AP3-201ENST00000453803 454 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 GEMIN2P1-201ENST00000454246 752 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 UBL5P4-201ENST00000562584 236 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 MIR3646-201ENST00000578301 84 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 AC007390.2-201ENST00000606229 3803 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 AF127577.6-201ENST00000623352 2191 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF223E7ERA6 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF223E7ERA6 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF223E7ERA6 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF223E7ERA6 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 AC093278.2-201ENST00000564956 2485 ntBASIC5.37□□□□□ -1.55
RNF223E7ERA6 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RNF223E7ERA6 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF223E7ERA6 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 RNU6-1167P-201ENST00000363227 94 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 RNU6-137P-201ENST00000363680 108 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 SNORA25.7-201ENST00000364375 127 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 MIR34A-201ENST00000385130 110 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 RNU6-159P-201ENST00000391080 106 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 EIF1AXP1-201ENST00000419267 435 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 RPL12P12-201ENST00000424633 501 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 AC022206.1-201ENST00000495947 347 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 Y_RNA.677-201ENST00000516401 85 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 RN7SKP238-201ENST00000516483 249 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 RNU6-638P-201ENST00000516582 104 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 IGKV3D-25-201ENST00000519599 235 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 TPRX1P1-201ENST00000557620 319 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 AC004232.1-201ENST00000571388 208 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 DEFB117-201ENST00000602356 141 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 AC108081.1-201ENST00000604358 221 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 SNORA74.4-201ENST00000607595 199 ntBASIC5.36□□□□□ -1.55
RNF223E7ERA6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF223E7ERA6 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
RNF223E7ERA6 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms