Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 GMPSP1-201ENST00000514075 579 ntBASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 RNA5SP135-201ENST00000517019 125 ntBASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 AC007536.1-201ENST00000533382 349 ntBASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 MIR3912-201ENST00000577566 105 ntBASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 AP003973.1-201ENST00000604639 691 ntBASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 AL627309.6-201ENST00000606857 840 ntBASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 AP000484.1-201ENST00000620067 1252 ntBASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 AP000676.3-201ENST00000623299 569 ntBASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 AL355596.1-201ENST00000565399 3996 ntBASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 AC011978.2-201ENST00000569835 2054 ntBASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 AC073346.2-201ENST00000624724 2058 ntBASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TRIM49D1C9J1S8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 RNU6-1214P-201ENST00000363650 109 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 RNU4-92P-201ENST00000363783 136 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 SNORA71.1-201ENST00000364523 117 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 RNU6-335P-201ENST00000364563 113 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 RNU6-413P-201ENST00000384115 107 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AF228730.1-201ENST00000397972 663 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 RNU6-757P-201ENST00000410334 100 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 RNA5SP120-201ENST00000410900 112 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC007435.1-201ENST00000421086 415 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AL139281.1-201ENST00000422120 335 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 HMGN2P20-201ENST00000437531 273 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC093156.1-201ENST00000440382 670 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 Z99714.1-201ENST00000450463 807 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC003982.1-202ENST00000469928 248 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 RPL23AP55-201ENST00000498163 452 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC104090.1-201ENST00000506341 1171 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 MTCYBP41-201ENST00000528913 1123 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AL133271.1-201ENST00000538229 291 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC107016.2-201ENST00000547968 190 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 ZNF321P-202ENST00000550843 495 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 GTF2IP8-201ENST00000560687 584 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC005951.1-201ENST00000576706 485 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 MIR4474-201ENST00000579189 78 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC017100.2-201ENST00000584628 355 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 YWHAQP7-201ENST00000603536 658 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC005046.1-201ENST00000608515 625 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AL442067.2-201ENST00000614033 363 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC021755.4-201ENST00000616620 456 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC097655.1-201ENST00000635075 318 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 AC046144.1-201ENST00000478559 1853 ntBASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM49D1C9J1S8 FAM35CP-201ENST00000554755 2470 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AC092593.1-201ENST00000515413 1815 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 HMGB1P5-201ENST00000255320 642 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 SNORA9-201ENST00000384215 133 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM49D1C9J1S8 RPL7P34-201ENST00000433316 712 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms