Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3□□□□□ -1.93
CCDC144AA2RUR9 AL592045.1-201ENST00000429867 352 ntBASIC3□□□□□ -1.93
CCDC144AA2RUR9 AC004866.2-201ENST00000438285 481 ntBASIC3□□□□□ -1.93
CCDC144AA2RUR9 HMGB1P12-201ENST00000438594 598 ntBASIC3□□□□□ -1.93
CCDC144AA2RUR9 TRIM60P18-201ENST00000441518 828 ntBASIC3□□□□□ -1.93
CCDC144AA2RUR9 RPL37P6-202ENST00000464216 403 ntBASIC3□□□□□ -1.93
CCDC144AA2RUR9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3□□□□□ -1.93
CCDC144AA2RUR9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3□□□□□ -1.93
CCDC144AA2RUR9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3□□□□□ -1.93
CCDC144AA2RUR9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CCDC144AA2RUR9 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC144AA2RUR9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3□□□□□ -1.93
CCDC144AA2RUR9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3□□□□□ -1.93
CCDC144AA2RUR9 ISCA1P3-201ENST00000577104 373 ntBASIC3□□□□□ -1.93
CCDC144AA2RUR9 AC008687.2-201ENST00000597865 520 ntBASIC3□□□□□ -1.93
CCDC144AA2RUR9 AC120053.1-201ENST00000607706 736 ntBASIC3□□□□□ -1.93
CCDC144AA2RUR9 TP73-AS1.1-201ENST00000611447 161 ntBASIC3□□□□□ -1.93
CCDC144AA2RUR9 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3□□□□□ -1.93
CCDC144AA2RUR9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3□□□□□ -1.93
CCDC144AA2RUR9 AC011978.2-201ENST00000569835 2054 ntBASIC3□□□□□ -1.93
CCDC144AA2RUR9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 Y_RNA.140-201ENST00000363474 103 ntBASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 HNRNPDP2-201ENST00000406475 478 ntBASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 SDR42E1P3-201ENST00000438345 502 ntBASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 AL157827.1-201ENST00000447622 132 ntBASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 AP000926.3-201ENST00000497201 299 ntBASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 RPL38P4-201ENST00000502376 214 ntBASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 AIG1P1-201ENST00000503376 148 ntBASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 MIR4498-201ENST00000577599 66 ntBASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 RPL23AP78-201ENST00000599928 470 ntBASIC2.99□□□□□ -1.93
CCDC144AA2RUR9 WWP1P1-201ENST00000466609 2769 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 RNU6-1140P-201ENST00000410517 106 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 AL392003.1-201ENST00000434394 243 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 HMGB1P45-201ENST00000435986 653 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 MED6P1-201ENST00000439659 713 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 ARPC3P2-201ENST00000457786 533 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 MTCYBP37-201ENST00000510642 1133 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 RNU6-56P-201ENST00000516986 93 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 PRELID2P1-201ENST00000552837 301 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 AC115085.1-201ENST00000588924 229 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 AC011494.1-201ENST00000596454 237 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 AC006023.2-201ENST00000609916 167 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 MIR4496-201ENST00000635896 61 ntBASIC2.98□□□□□ -1.93
CCDC144AA2RUR9 SNORA51.2-201ENST00000364595 132 ntBASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 MTCO1P43-201ENST00000431831 488 ntBASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 RPL23AP33-201ENST00000442301 452 ntBASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AC072039.1-201ENST00000477611 581 ntBASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 MIR5002-201ENST00000584713 97 ntBASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AC010615.3-201ENST00000597319 394 ntBASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AC113368.1-201ENST00000603736 382 ntBASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AC090617.7-201ENST00000623952 126 ntBASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AC009950.2-201ENST00000636548 183 ntBASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 MTND5P28-201ENST00000438005 1594 ntBASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 AC110774.1-201ENST00000623567 2018 ntBASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CCDC144AA2RUR9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
CCDC144AA2RUR9 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.96□□□□□ -1.94
CCDC144AA2RUR9 MIR1287-201ENST00000408492 90 ntBASIC2.96□□□□□ -1.94
CCDC144AA2RUR9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC144AA2RUR9 XKRYP4-201ENST00000414395 483 ntBASIC2.96□□□□□ -1.94
CCDC144AA2RUR9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC144AA2RUR9 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC144AA2RUR9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC144AA2RUR9 XKRYP5-201ENST00000449659 483 ntBASIC2.96□□□□□ -1.94
CCDC144AA2RUR9 AL445669.2-201ENST00000454425 421 ntBASIC2.96□□□□□ -1.94
CCDC144AA2RUR9 RPL21P104-201ENST00000464143 478 ntBASIC2.96□□□□□ -1.94
CCDC144AA2RUR9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC144AA2RUR9 RNU6-1004P-201ENST00000516584 111 ntBASIC2.96□□□□□ -1.94
CCDC144AA2RUR9 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms