Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AC097714.1-201ENST00000511272 1647 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 RNA5SP68-201ENST00000363885 119 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 RAB11AP1-201ENST00000442978 646 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AC004022.1-201ENST00000447766 1066 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AL109933.2-201ENST00000452651 260 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AC234775.1-201ENST00000454247 670 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 RNA5SP310-201ENST00000459084 116 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 LINC00888-204ENST00000487386 421 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 RPL37P25-201ENST00000507308 276 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AC119751.5-201ENST00000514077 770 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 RNA5SP356-201ENST00000515972 94 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AC027176.1-201ENST00000560204 514 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AC027104.1-201ENST00000563702 681 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 MIR4446-201ENST00000578505 67 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 NUTF2P8-201ENST00000604593 363 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 MIR6817-201ENST00000615588 66 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AC007275.1-201ENST00000621243 671 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AL109659.3-201ENST00000624985 950 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 FO624990.1-201ENST00000636373 85 ntBASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 RNU6-821P-201ENST00000390995 107 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 RPS4XP3-201ENST00000398541 413 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 U3.37-201ENST00000408528 213 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 RNA5SP184-201ENST00000411071 108 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 RPS15AP38-201ENST00000413110 372 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 NUP35P1-201ENST00000422734 947 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC236972.1-201ENST00000433225 199 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 RPS15AP28-201ENST00000435088 386 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 CR769767.1-201ENST00000436337 346 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 MTND1P33-201ENST00000446251 917 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 RPS3P1-201ENST00000456781 192 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC015908.1-201ENST00000478739 476 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC087241.2-201ENST00000535801 324 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AP005205.1-201ENST00000563503 508 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC007621.1-201ENST00000604544 437 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC106791.2-201ENST00000604680 391 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC013468.1-201ENST00000608680 598 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC046143.2-201ENST00000609789 160 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 CR589904.2-201ENST00000612533 440 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC140725.3-201ENST00000616193 880 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC024595.1-201ENST00000623088 387 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 MIR1291-201ENST00000627649 87 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 AC017104.5-201ENST00000637647 639 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 ZNF90P1-201ENST00000480493 1951 ntBASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV3A0A0B4J244 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 MTND5P31-201ENST00000419366 1374 ntBASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 SNORD114-30-201ENST00000364448 72 ntBASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 MIR144-201ENST00000384886 86 ntBASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 RNA5SP252-201ENST00000391131 119 ntBASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 ANAPC10P1-201ENST00000395991 556 ntBASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 MTND4LP20-201ENST00000402379 270 ntBASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 RNU2-17P-201ENST00000410290 190 ntBASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 HMGB3P31-201ENST00000413333 595 ntBASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV3A0A0B4J244 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms