Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 RNU6-619P-201ENST00000365146 108 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 MIR607-201ENST00000385241 96 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 SSXP10-201ENST00000402595 565 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 RNA5SP508-201ENST00000411327 119 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC096533.1-201ENST00000411645 353 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 RPLP0P7-201ENST00000416050 667 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 EI24P1-201ENST00000416584 867 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC096632.1-201ENST00000427395 310 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 RAB11AP1-201ENST00000442978 646 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 RNA5SP76-201ENST00000516277 87 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AP003122.3-201ENST00000526316 255 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC010198.2-201ENST00000550612 259 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC090666.1-201ENST00000578241 445 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 MIR4474-201ENST00000579189 78 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC011468.4-201ENST00000603942 409 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC093673.2-201ENST00000609674 331 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 Z99129.2-201ENST00000619967 314 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 AP000526.1-201ENST00000603308 1388 ntBASIC3.36□□□□□ -1.87
USP16Q9Y5T5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
USP16Q9Y5T5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP16Q9Y5T5 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP16Q9Y5T5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
USP16Q9Y5T5 OR1L1-202ENST00000373686 1083 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 SFR1P1-201ENST00000403720 688 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AC073264.1-201ENST00000411508 416 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AC093151.1-201ENST00000427711 313 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 HMGN2P20-201ENST00000437531 273 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.35□□□□□ -1.87
USP16Q9Y5T5 HSPE1P6-201ENST00000479457 291 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 GAPDHP39-201ENST00000481866 979 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AC108860.1-201ENST00000484521 383 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AC048346.1-201ENST00000510247 144 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AC008413.1-201ENST00000511864 177 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP16Q9Y5T5 RNA5SP320-201ENST00000516263 124 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AC010376.1-201ENST00000522101 334 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.35□□□□□ -1.87
USP16Q9Y5T5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.35□□□□□ -1.87
USP16Q9Y5T5 MIR4666A-201ENST00000580160 79 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.35□□□□□ -1.87
USP16Q9Y5T5 RPAP2P1-201ENST00000603626 1168 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AL133445.2-201ENST00000611191 527 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AP003485.1-201ENST00000625093 753 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AC013437.2-201ENST00000639587 677 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 MTND4P9-201ENST00000507819 1346 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 AC108206.1-201ENST00000570186 4159 ntBASIC3.35□□□□□ -1.87
USP16Q9Y5T5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP16Q9Y5T5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP16Q9Y5T5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
USP16Q9Y5T5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.34□□□□□ -1.87
USP16Q9Y5T5 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP16Q9Y5T5 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
USP16Q9Y5T5 SFR1P2-201ENST00000421841 730 ntBASIC3.34□□□□□ -1.87
USP16Q9Y5T5 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.34□□□□□ -1.87
USP16Q9Y5T5 VDAC1P3-201ENST00000434069 851 ntBASIC3.34□□□□□ -1.87
USP16Q9Y5T5 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP16Q9Y5T5 TRBV12-1-201ENST00000479785 344 ntBASIC3.34□□□□□ -1.87
USP16Q9Y5T5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.34□□□□□ -1.87
USP16Q9Y5T5 RNA5SP135-201ENST00000517019 125 ntBASIC3.34□□□□□ -1.87
USP16Q9Y5T5 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP16Q9Y5T5 AP001646.1-201ENST00000527936 915 ntBASIC3.34□□□□□ -1.87
USP16Q9Y5T5 AL133271.1-201ENST00000538229 291 ntBASIC3.34□□□□□ -1.87
USP16Q9Y5T5 AC243972.3-201ENST00000539655 198 ntBASIC3.34□□□□□ -1.87
USP16Q9Y5T5 ZNF971P-201ENST00000562068 1249 ntBASIC3.34□□□□□ -1.87
USP16Q9Y5T5 MIR4635-201ENST00000583759 79 ntBASIC3.34□□□□□ -1.87
USP16Q9Y5T5 AC097504.2-201ENST00000608088 454 ntBASIC3.34□□□□□ -1.87
USP16Q9Y5T5 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.34□□□□□ -1.87
USP16Q9Y5T5 AL590808.1-201ENST00000618696 141 ntBASIC3.34□□□□□ -1.87
USP16Q9Y5T5 VN1R7P-201ENST00000619242 903 ntBASIC3.34□□□□□ -1.87
USP16Q9Y5T5 MTND5P31-201ENST00000419366 1374 ntBASIC3.34□□□□□ -1.88
USP16Q9Y5T5 MTND4P34-201ENST00000572715 1371 ntBASIC3.34□□□□□ -1.88
USP16Q9Y5T5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
USP16Q9Y5T5 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
USP16Q9Y5T5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
USP16Q9Y5T5 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.33□□□□□ -1.88
USP16Q9Y5T5 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms