Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 RNU6-798P-201ENST00000516912 103 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AP003467.2-201ENST00000520175 319 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC103783.1-201ENST00000520506 373 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC109635.4-202ENST00000531666 412 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 YPEL5P3-201ENST00000547227 352 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC123904.2-201ENST00000548059 300 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC069240.1-201ENST00000548774 375 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AL121603.1-201ENST00000553815 142 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC022968.1-201ENST00000567372 442 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 OR4K8P-201ENST00000578842 1048 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC012417.1-201ENST00000582307 1039 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 HMGN1P30-201ENST00000589286 268 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 CKS1BP3-201ENST00000600888 237 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 RNU4-89P-201ENST00000607443 133 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC103710.1-201ENST00000610003 901 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AC013562.2-201ENST00000611632 603 ntBASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLDN16Q9Y5I7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 SNORA60-201ENST00000362396 134 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 RNA5SP52-201ENST00000362448 134 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 RNA5SP388-201ENST00000362584 119 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 RNA5SP283-201ENST00000365604 119 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 MTCO1P21-201ENST00000416634 589 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AL353777.1-201ENST00000425552 326 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AL117339.2-201ENST00000430475 180 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 MTND1P34-201ENST00000438556 671 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 MTND6P13-201ENST00000443510 523 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 RAC1P7-201ENST00000445367 377 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 RNU6-1095P-201ENST00000516148 108 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AP003181.2-201ENST00000528941 181 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AL356432.3-201ENST00000568952 465 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 SNORD84-203ENST00000584275 78 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 UBE2L4-201ENST00000587688 464 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 XIAPP1-201ENST00000603162 600 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AC073648.5-201ENST00000603502 305 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AL139395.1-201ENST00000603662 160 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AC090578.1-201ENST00000604955 591 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 NDUFA8P1-201ENST00000605525 367 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AL590282.1-201ENST00000610379 1136 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AC008121.2-201ENST00000614647 523 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AL731566.2-201ENST00000618971 317 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AL158801.5-201ENST00000623123 465 ntBASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN16Q9Y5I7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
CLDN16Q9Y5I7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
CLDN16Q9Y5I7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN16Q9Y5I7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN16Q9Y5I7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN16Q9Y5I7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN16Q9Y5I7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CLDN16Q9Y5I7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN16Q9Y5I7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms