Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.91□□□□□ -1.62
CTDP1Q9Y5B0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CTDP1Q9Y5B0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CTDP1Q9Y5B0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTDP1Q9Y5B0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTDP1Q9Y5B0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTDP1Q9Y5B0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.9□□□□□ -1.62
CTDP1Q9Y5B0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CTDP1Q9Y5B0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.9□□□□□ -1.62
CTDP1Q9Y5B0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CTDP1Q9Y5B0 XPOTP1-201ENST00000443317 2398 ntBASIC4.9□□□□□ -1.62
CTDP1Q9Y5B0 GNG5P1-201ENST00000255500 204 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 RNU6-1085P-201ENST00000363576 107 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 RNA5SP283-201ENST00000365604 119 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 SNORA37-201ENST00000384504 129 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AL117339.2-201ENST00000430475 180 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 RPL17P49-201ENST00000443728 411 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 C1DP4-201ENST00000455429 424 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AL445433.1-201ENST00000457507 257 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 UBDP1-202ENST00000457888 382 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AP000873.1-201ENST00000463987 400 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AC023598.1-201ENST00000472521 361 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AC012158.1-204ENST00000483430 465 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AC007182.2-201ENST00000489251 402 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AP003122.4-201ENST00000530980 758 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 CYCSP28-201ENST00000534284 321 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 GLYCAM1-201ENST00000546596 285 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 HSPE1P3-201ENST00000559254 309 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AC025678.1-201ENST00000567861 338 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 UBE2V2P2-201ENST00000587677 504 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AC005255.1-201ENST00000593748 216 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 RNF138P2-201ENST00000603490 592 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AC009268.2-201ENST00000621925 457 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 MIR1321-201ENST00000637766 79 ntBASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTDP1Q9Y5B0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 SAGE4P-201ENST00000442271 3381 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 MIR372-201ENST00000362225 67 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 RNU1-20P-201ENST00000363314 162 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 Y_RNA.160-201ENST00000363677 92 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 RNA5SP130-201ENST00000364431 114 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 RNA5SP513-201ENST00000364648 118 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 RNU6-1103P-201ENST00000384150 107 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 RNU6-1011P-201ENST00000384668 107 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 RNU6-952P-201ENST00000391164 108 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 ENSAP1-201ENST00000392855 326 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AL161631.1-201ENST00000417933 486 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 MTND1P14-201ENST00000427400 950 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 FTH1P6-201ENST00000430768 320 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 RPEP2-201ENST00000432149 701 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 USP9YP7-201ENST00000436723 430 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 RSU1P2-202ENST00000437884 485 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 USP9YP32-201ENST00000452432 430 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 BX322784.1-201ENST00000455793 1077 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 MTCO3P2-201ENST00000457365 171 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC026410.2-201ENST00000460281 156 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 MTCYBP18-201ENST00000501056 747 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 RNU6-1003P-201ENST00000517099 105 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AL512310.1-201ENST00000548639 172 ntBASIC4.89□□□□□ -1.63
CTDP1Q9Y5B0 AC008127.2-201ENST00000549925 1075 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms