Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SET-203ENST00000372688 801 ntTSL 2 BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 ATF1P1-201ENST00000406040 927 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 RNA5SP508-201ENST00000411327 119 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 UBE2V1P6-201ENST00000430840 422 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 MRPS33P4-201ENST00000434892 317 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 RABEPKP1-201ENST00000440529 1026 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 AL035407.2-201ENST00000454090 378 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 KLRA1P-201ENST00000503499 986 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 AC017037.2-201ENST00000513850 890 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 RNA5SP281-201ENST00000516504 135 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 AC109329.2-201ENST00000519658 482 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 ERHP1-201ENST00000523006 310 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 AC022884.3-201ENST00000579571 248 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 MIR4658-201ENST00000584344 65 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 AC008739.2-201ENST00000597006 317 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 MTCO3P22-201ENST00000603219 784 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 AL356280.1-201ENST00000603614 379 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 IGHVIII-44-202ENST00000636235 289 ntBASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
UBE2D4Q9Y2X8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 RNU1-91P-201ENST00000364746 163 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 RNU6-1072P-201ENST00000384703 107 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 RNU6-443P-201ENST00000384780 107 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AP002784.2-201ENST00000397300 549 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 UBE2V1P2-201ENST00000397758 440 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AL030996.1-201ENST00000411430 235 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AC009963.1-201ENST00000417265 157 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 RPL7P37-201ENST00000425095 738 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 GPM6BP3-201ENST00000442797 145 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AC126389.1-201ENST00000477436 290 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 HMGB1P22-201ENST00000505315 124 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AP002770.2-201ENST00000543613 532 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AC090616.3-201ENST00000582184 217 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 NRBF2P5-201ENST00000603087 788 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 DUXAP9-208ENST00000622815 614 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AC012640.5-201ENST00000623897 319 ntBASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.45□□□□□ -2.18
UBE2D4Q9Y2X8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AC046144.1-201ENST00000478559 1853 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AL512504.1-201ENST00000415494 778 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 PTP4A1P7-201ENST00000423476 514 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AC023347.2-201ENST00000433994 462 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 RPS7P2-201ENST00000435134 607 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 DNAJC19P8-201ENST00000452887 259 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 UBE2DNL-203ENST00000474922 222 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AL135752.1-201ENST00000479477 471 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 OR11H5P-201ENST00000554039 926 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 MIR3935-201ENST00000583472 104 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 GLUD1P4-201ENST00000590914 418 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AC103881.1-201ENST00000603476 538 ntBASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.44□□□□□ -2.18
UBE2D4Q9Y2X8 AL391834.1-201ENST00000609609 560 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms