Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 AC018809.2-201ENST00000602436 3823 ntBASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
HIF3AQ9Y2N7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 RN7SKP275-201ENST00000364626 301 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 Y_RNA.555-201ENST00000384673 110 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 RNU6-1093P-201ENST00000391194 107 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 AL133482.1-201ENST00000415988 498 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 RPL30P3-201ENST00000424262 333 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 NDUFB4P8-201ENST00000435351 367 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 RPL12P46-201ENST00000436610 195 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 NOTCH2P1-201ENST00000443481 624 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 OR2AQ1P-201ENST00000451972 200 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 AC234775.1-201ENST00000454247 670 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 AZGP1P2-201ENST00000454506 345 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 ACA64.1-201ENST00000459171 127 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 PGAM1P13-201ENST00000507497 754 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 AC114781.3-201ENST00000512083 142 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 SNORA70.20-201ENST00000516848 126 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 RN7SKP277-201ENST00000516895 283 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 AC103783.1-201ENST00000520506 373 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 TOMM20P1-201ENST00000534518 427 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 AL031176.1-201ENST00000604554 466 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 TUG1_2.1-201ENST00000614234 87 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 RN7SL544P-201ENST00000617232 284 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 RN7SL763P-201ENST00000620922 284 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 AC027287.1-201ENST00000553115 1453 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 AC104964.3-201ENST00000606115 2860 ntBASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.04□□□□□ -1.6
HIF3AQ9Y2N7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC000374.1-201ENST00000434698 1745 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC112198.2-201ENST00000426589 6996 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 SNORA70.6-201ENST00000383934 134 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 RNU6-434P-201ENST00000384376 107 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 MT-TC-201ENST00000387405 66 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AL009179.1-201ENST00000406085 265 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 RPL12P34-201ENST00000424532 479 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC073465.2-201ENST00000440938 498 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 MTCO3P8-201ENST00000453691 755 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 RNU7-187P-201ENST00000458985 68 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC008481.1-201ENST00000463278 396 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 DEFB109F-201ENST00000491870 277 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AL049839.1-201ENST00000556151 657 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC084783.1-201ENST00000565846 910 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC015720.2-201ENST00000567709 334 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 OR1F2P-201ENST00000570470 933 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 AC110801.1-201ENST00000623590 212 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 EIF2AP4-201ENST00000424793 1781 ntBASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.03□□□□□ -1.6
HIF3AQ9Y2N7 DDX10P1-201ENST00000448545 1933 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms