Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.74□□□□□ -1.33
PDZRN3Q9UPQ7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 MIR192-201ENST00000384915 110 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 MIR137-201ENST00000385223 102 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 CYB5AP4-201ENST00000396692 399 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC013442.1-201ENST00000397347 228 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 RNU2-25P-201ENST00000411041 191 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC016397.1-201ENST00000412463 242 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC093716.1-201ENST00000435923 377 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 BTF3P6-201ENST00000448054 499 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC005297.2-201ENST00000450430 606 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC097484.1-201ENST00000471148 389 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 RPS24P16-201ENST00000497294 392 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC083829.1-201ENST00000503756 657 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC016559.2-201ENST00000510759 359 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC090312.1-201ENST00000580637 348 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AL121992.2-201ENST00000606262 256 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 BX284668.6-201ENST00000606899 438 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 ATP5A1P2-202ENST00000616464 443 ntBASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.73□□□□□ -1.33
PDZRN3Q9UPQ7 AC097461.1-201ENST00000568928 2821 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 ADAM5-202ENST00000399789 1942 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 RNA5SP123-201ENST00000363244 119 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 RNY3P11-201ENST00000364153 102 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 Y_RNA.237-201ENST00000364439 102 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 Y_RNA.277-201ENST00000364754 102 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 RNU6-729P-201ENST00000384399 107 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 RNU6-244P-201ENST00000391028 104 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 RNU6-1203P-201ENST00000410703 110 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 RPL21P38-201ENST00000418090 167 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 EIF4EP2-201ENST00000422816 654 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 AC091286.1-201ENST00000431233 461 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 RPS3AP12-201ENST00000443616 753 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 RPL21P104-201ENST00000464143 478 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 AC009127.1-201ENST00000467090 155 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 RN7SL346P-201ENST00000491561 294 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 RNU6-397P-201ENST00000516226 104 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 AP004607.2-201ENST00000533949 322 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 CYCSP28-201ENST00000534284 321 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 DUX4L52-201ENST00000549363 777 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 MIR4775-201ENST00000581168 75 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 AC105224.1-201ENST00000587055 421 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 AL022394.1-201ENST00000606979 292 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 AC073869.10-201ENST00000642016 354 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 ZNF72P-201ENST00000425869 1908 ntBASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDZRN3Q9UPQ7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
PDZRN3Q9UPQ7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PDZRN3Q9UPQ7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PDZRN3Q9UPQ7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
PDZRN3Q9UPQ7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
PDZRN3Q9UPQ7 AL109809.4-201ENST00000603520 2185 ntBASIC6.71□□□□□ -1.33
PDZRN3Q9UPQ7 CASC19-284ENST00000642142 1868 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 MIR411-201ENST00000362239 96 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 Y_RNA.22-201ENST00000362492 102 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-562P-201ENST00000362731 107 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 Y_RNA.54-201ENST00000362766 105 ntBASIC6.71□□□□□ -1.34
PDZRN3Q9UPQ7 Y_RNA.105-201ENST00000363182 111 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms