Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AL512286.1-201ENST00000439244 400 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 BMI1P1-201ENST00000445879 941 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 ZNF114P1-201ENST00000453500 292 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC084198.1-201ENST00000477747 402 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC022447.3-201ENST00000506865 495 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 SNORA74D-201ENST00000516404 141 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC007458.1-201ENST00000542812 373 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC024909.2-201ENST00000553035 286 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC011260.1-201ENST00000578420 472 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC084782.3-201ENST00000612282 578 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 U73479.1-201ENST00000618062 168 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC004009.2-201ENST00000623016 728 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AL356266.1-201ENST00000623311 483 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 AC139792.2-201ENST00000624218 587 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 MTND5P1-201ENST00000445440 1375 ntBASIC4.12□□□□□ -1.75
HDAC6Q9UBN7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC007823.1-201ENST00000569932 1566 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 SNORD9-201ENST00000362566 104 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 MIR153-1-201ENST00000384914 90 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 RPL31P1-201ENST00000398116 372 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 RPS27AP14-201ENST00000422868 454 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 MTCO3P5-201ENST00000433620 714 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 MTND5P14-201ENST00000441481 1267 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 MTCO1P27-201ENST00000448269 226 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC007967.1-201ENST00000455422 1159 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 SNORD105B-201ENST00000458770 79 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 snoU13.24-201ENST00000458998 104 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 SNORD108-201ENST00000459332 71 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 RPL31P50-201ENST00000471002 296 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC017015.1-201ENST00000477387 286 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AL358832.1-201ENST00000497800 389 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 RN7SKP83-201ENST00000516512 178 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 OR4R3P-201ENST00000525084 838 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AP003385.6-201ENST00000531603 374 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 OR6C7P-201ENST00000547875 934 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AP005136.1-201ENST00000579765 429 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 BBIP1P1-201ENST00000602999 279 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AL442067.2-201ENST00000614033 363 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AC092140.2-201ENST00000618027 521 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 AL022578.1-201ENST00000439330 1433 ntBASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HDAC6Q9UBN7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 RNY4P24-201ENST00000362735 96 ntBASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 MTND4LP20-201ENST00000402379 270 ntBASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 MTCYBP24-201ENST00000420387 1106 ntBASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 AL590399.6-201ENST00000446396 307 ntBASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 MTCO2P7-201ENST00000446518 666 ntBASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 KATNBL1P6-201ENST00000453433 915 ntBASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 SNRPFP4-201ENST00000456366 242 ntBASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 AC080014.1-201ENST00000496877 1201 ntBASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 HSPD1P15-201ENST00000505573 1122 ntBASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 AC026427.2-201ENST00000506228 536 ntBASIC4.1□□□□□ -1.75
HDAC6Q9UBN7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms