Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 MAPK10-263ENST00000641052 4307 ntBASIC4.46□□□□□ -1.7
MKS1Q9NXB0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
MKS1Q9NXB0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 ZNF137P-201ENST00000456718 1920 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 SNORD6-201ENST00000365444 73 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 Y_RNA.402-201ENST00000383972 102 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 RPS4XP8-201ENST00000402039 771 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 MIR1277-201ENST00000408536 78 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 RN7SKP100-201ENST00000411258 284 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 RPL7AP73-201ENST00000413490 353 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 FAR2P4-202ENST00000425399 584 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AL732292.1-201ENST00000426692 226 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 MTND1P2-201ENST00000430604 821 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC016831.4-201ENST00000438302 307 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 MTCO3P45-201ENST00000443036 613 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC022364.2-201ENST00000457963 554 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC010285.1-201ENST00000470580 392 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC092989.1-201ENST00000481235 277 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 MTAPP1-201ENST00000489154 819 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 RN7SL629P-201ENST00000489622 285 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC110792.1-201ENST00000491826 472 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC146944.2-203ENST00000502493 354 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC093824.1-201ENST00000508796 343 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC139495.1-202ENST00000513164 354 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 RNU7-51P-201ENST00000516560 62 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 RNA5SP34-201ENST00000516887 130 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 BGLT3-201ENST00000564523 994 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC234778.2-201ENST00000566241 354 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC025678.1-201ENST00000567861 338 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC016180.1-201ENST00000567945 403 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 MIR3691-201ENST00000578066 90 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 MIR1269B-201ENST00000580405 75 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 Z98200.1-201ENST00000607298 470 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 BX323046.1-201ENST00000610145 535 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC012531.5-201ENST00000611375 151 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AL512624.1-201ENST00000613638 469 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 TAB3P1-202ENST00000452645 1634 ntBASIC4.45□□□□□ -1.7
MKS1Q9NXB0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.45□□□□□ -1.7
MKS1Q9NXB0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 INTS6P1-201ENST00000504674 2530 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 AC116667.1-201ENST00000604855 2072 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 EXOC5P1-201ENST00000510543 1969 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 RNA5SP305-201ENST00000362665 119 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 SNORA23-201ENST00000365128 182 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 Y_RNA.453-201ENST00000384223 109 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 RNU6-74P-201ENST00000384235 107 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 Y_RNA.481-201ENST00000384373 102 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 MIR558-201ENST00000384920 94 ntBASIC4.44□□□□□ -1.7
MKS1Q9NXB0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MKS1Q9NXB0 RNU2-36P-201ENST00000410361 191 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms