Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AL359198.2-201ENST00000611836 194 ntBASIC8.25□□□□□ -1.09
RNF216Q9NWF9 Y_RNA.818-201ENST00000618813 71 ntBASIC8.25□□□□□ -1.09
RNF216Q9NWF9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 AC129908.1-201ENST00000624553 648 ntBASIC8.25□□□□□ -1.09
RNF216Q9NWF9 AP000550.3-201ENST00000637734 379 ntBASIC8.25□□□□□ -1.09
RNF216Q9NWF9 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 AP000866.6-201ENST00000638898 3579 ntBASIC8.25□□□□□ -1.09
RNF216Q9NWF9 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC8.25□□□□□ -1.09
RNF216Q9NWF9 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 AC010329.2-201ENST00000595195 2737 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 AL133383.2-201ENST00000622958 2336 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 RNU6-1141P-201ENST00000364520 107 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 MIR544A-201ENST00000384855 91 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 U3.31-201ENST00000408113 216 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 RNU2-68P-201ENST00000410878 191 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 AC012306.1-201ENST00000423267 114 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 AL590399.4-201ENST00000436561 601 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 REREP2Y-201ENST00000439103 200 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 RN7SL369P-201ENST00000477138 299 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 RN7SL259P-201ENST00000478499 253 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 RNU6-158P-201ENST00000517104 100 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 HMGN2P47-201ENST00000559378 272 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 AL121985.2-201ENST00000621192 555 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 AC099667.1-201ENST00000624222 469 ntBASIC8.24□□□□□ -1.09
RNF216Q9NWF9 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RNF216Q9NWF9 AL589743.1-201ENST00000551932 2712 ntBASIC8.23□□□□□ -1.09
RNF216Q9NWF9 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 AC005618.1-201ENST00000606901 3148 ntBASIC8.23□□□□□ -1.09
RNF216Q9NWF9 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 SNORA63.5-201ENST00000363548 123 ntBASIC8.23□□□□□ -1.09
RNF216Q9NWF9 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 AC245028.1-201ENST00000423259 256 ntBASIC8.23□□□□□ -1.09
RNF216Q9NWF9 HMGB1P37-201ENST00000439613 609 ntBASIC8.23□□□□□ -1.09
RNF216Q9NWF9 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 TREML3P-201ENST00000457327 501 ntBASIC8.23□□□□□ -1.09
RNF216Q9NWF9 SNORA35.1-201ENST00000458908 128 ntBASIC8.23□□□□□ -1.09
RNF216Q9NWF9 AC007215.1-201ENST00000464893 276 ntBASIC8.23□□□□□ -1.09
RNF216Q9NWF9 RNA5SP96-201ENST00000516041 107 ntBASIC8.23□□□□□ -1.09
RNF216Q9NWF9 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 SNX18P27-201ENST00000523611 779 ntBASIC8.23□□□□□ -1.09
RNF216Q9NWF9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 AC025946.2-201ENST00000603398 234 ntBASIC8.23□□□□□ -1.09
RNF216Q9NWF9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RNF216Q9NWF9 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 Y_RNA.587-201ENST00000391210 103 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 RN7SKP61-201ENST00000410642 295 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 AC007919.1-201ENST00000429380 217 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 AC233724.1-201ENST00000503894 233 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 AC114781.3-201ENST00000512083 142 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 RNU1-104P-201ENST00000517280 175 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 IGKV1-22-201ENST00000524313 326 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 AC068631.3-201ENST00000538831 225 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 RN7SL14P-201ENST00000579715 298 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 AC061975.3-201ENST00000583209 244 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 AC019159.1-201ENST00000605094 187 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 AL161891.1-201ENST00000621575 4636 ntBASIC8.22□□□□□ -1.09
RNF216Q9NWF9 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RNF216Q9NWF9 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms