Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
LIN7CQ9NUP9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 HSPE1P11-201ENST00000339579 310 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 Y_RNA.1-201ENST00000352915 104 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 MIR937-201ENST00000401271 86 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC140479.3-201ENST00000418944 1126 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 USP12PX-201ENST00000432383 1057 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 GPR143P-201ENST00000434155 205 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 PSPHP1-201ENST00000450062 261 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 FGF7P3-201ENST00000454645 303 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC092451.1-201ENST00000480211 153 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 VN1R105P-201ENST00000486595 910 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 RPS23P1-201ENST00000491662 432 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 SAP18P1-201ENST00000512058 390 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 OR7H2P-201ENST00000513483 306 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 RNA5SP497-201ENST00000516081 97 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 RNU7-51P-201ENST00000516560 62 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 HMGB1P41-201ENST00000520234 440 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC093012.1-202ENST00000549403 582 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 RN7SL652P-201ENST00000577769 300 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC105224.1-201ENST00000587055 421 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC098848.2-201ENST00000588023 330 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AL391646.1-201ENST00000603860 190 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC107304.1-201ENST00000604229 296 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AP002360.3-201ENST00000607673 710 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AL161616.1-201ENST00000611867 286 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 SDR42E1P2-201ENST00000614861 481 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AL157786.1-207ENST00000627771 695 ntBASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.74□□□□□ -1.81
LIN7CQ9NUP9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 DEFB108F-201ENST00000344638 222 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 MTCO3P40-201ENST00000392516 676 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 LAP3P1-201ENST00000403648 294 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 RNU2-71P-201ENST00000411395 189 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC069157.1-201ENST00000421749 137 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC018630.2-202ENST00000422992 927 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 MTND3P21-201ENST00000433774 331 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AL359265.2-201ENST00000434367 631 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 SNORD97-201ENST00000459187 142 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 VN1R17P-201ENST00000472048 1090 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 RPS27AP1-201ENST00000475545 471 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AL049874.1-201ENST00000489560 388 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC015795.1-201ENST00000513669 327 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AP003072.2-201ENST00000527756 676 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 TPRKBP2-201ENST00000565969 475 ntBASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.73□□□□□ -1.81
LIN7CQ9NUP9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms