Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
GCM1Q9NP62 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GCM1Q9NP62 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GCM1Q9NP62 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 AC005332.5-201ENST00000591222 2919 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 RNA5SP391-201ENST00000363456 119 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 RNU5E-6P-201ENST00000365574 115 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 RNA5SP339-201ENST00000390987 122 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 PPIAP9-201ENST00000403866 498 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 RNA5SP296-201ENST00000410523 111 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 RNU2-23P-201ENST00000410545 195 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 COX6CP15-201ENST00000426313 211 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 RPL7L1P9-201ENST00000431298 745 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 GAPDHP25-201ENST00000447061 1001 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 RPS15AP27-201ENST00000449183 343 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 RNU6-1132P-201ENST00000459214 107 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 AC087879.1-201ENST00000474343 374 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 Y_RNA.680-201ENST00000516441 93 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 SCARNA20.4-201ENST00000516969 131 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 AC126177.5-201ENST00000549599 178 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 MIR4489-201ENST00000578869 62 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 MIR4716-201ENST00000579628 84 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 RN7SL356P-201ENST00000582228 248 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 MIR3941-201ENST00000582572 103 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 IMMP1LP3-201ENST00000604197 224 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 AC109583.2-201ENST00000617367 129 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 AC015967.1-201ENST00000619893 476 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 AC074101.1-201ENST00000637861 241 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 AL078621.3-201ENST00000623707 2042 ntBASIC4.56□□□□□ -1.68
GCM1Q9NP62 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.56□□□□□ -1.68
GCM1Q9NP62 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GCM1Q9NP62 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GCM1Q9NP62 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GCM1Q9NP62 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
GCM1Q9NP62 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.55□□□□□ -1.68
GCM1Q9NP62 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GCM1Q9NP62 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GCM1Q9NP62 AP001029.2-203ENST00000589795 4910 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
GCM1Q9NP62 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
GCM1Q9NP62 RNA5SP183-201ENST00000362452 119 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 Y_RNA.210-201ENST00000364161 110 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 RNU6-472P-201ENST00000384299 107 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 Y_RNA.473-201ENST00000384333 102 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 RNU6-550P-201ENST00000391057 101 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 DBIP1-201ENST00000401435 260 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 AL583834.1-201ENST00000406943 343 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 RNA5SP487-201ENST00000410186 122 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.55□□□□□ -1.68
GCM1Q9NP62 BX682237.1-201ENST00000415016 335 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 GJA6P-201ENST00000415117 1042 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.55□□□□□ -1.68
GCM1Q9NP62 USMG5P1-201ENST00000425964 177 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.55□□□□□ -1.68
GCM1Q9NP62 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.55□□□□□ -1.68
GCM1Q9NP62 RPS11P7-201ENST00000442125 465 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 OR1H1P-201ENST00000448731 937 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 AC104073.1-201ENST00000451988 151 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.55□□□□□ -1.68
GCM1Q9NP62 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.55□□□□□ -1.68
GCM1Q9NP62 AC112492.4-201ENST00000456549 352 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 SNORD121B-201ENST00000458838 81 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 RPL21P8-201ENST00000465083 535 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 AL136126.1-201ENST00000473603 402 ntBASIC4.55□□□□□ -1.68
GCM1Q9NP62 AC021146.3-201ENST00000511911 260 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms