Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL121594.5-201ENST00000631724 573 ntBASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TM9SF3Q9HD45 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 MTCO1P4-201ENST00000520516 1409 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 SNORA5B-201ENST00000363786 132 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 RNU6-354P-201ENST00000383862 107 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 RNU6-610P-201ENST00000384264 107 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 RNU6-878P-201ENST00000384578 110 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 SFR1P2-201ENST00000421841 730 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AL512637.2-201ENST00000431287 1256 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 Z99127.3-201ENST00000448158 395 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 HMGN1P5-201ENST00000448591 263 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 VN1R104P-201ENST00000505115 1009 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 RNA5SP385-201ENST00000515947 110 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 SNORA70.16-201ENST00000516390 95 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 RNU6-56P-201ENST00000516986 93 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AP001317.1-201ENST00000531194 960 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AL356585.4-201ENST00000623078 1229 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AC026634.1-201ENST00000634369 198 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 MIR622-201ENST00000638396 96 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 AC087359.1-201ENST00000508335 1740 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 MTCO1P23-201ENST00000415223 1526 ntBASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TM9SF3Q9HD45 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 ANKRD36P1-201ENST00000344424 659 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 SNORA63.3-201ENST00000362682 132 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 RNU6-839P-201ENST00000363347 108 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 RNU6-1155P-201ENST00000363554 107 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 SNORA71.1-201ENST00000364523 117 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 SNORA51.4-201ENST00000364993 124 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 SNORA54-201ENST00000384281 123 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AL035405.1-201ENST00000400795 710 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AL133264.1-201ENST00000407157 562 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 RPL32P35-201ENST00000415214 394 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 TAF13P2-201ENST00000416876 286 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 OR2AS1P-201ENST00000427827 319 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC244505.4-201ENST00000434905 287 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 CST9LP2-201ENST00000437612 320 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 SSXP5-201ENST00000443473 287 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC008379.1-201ENST00000463655 464 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC092902.1-201ENST00000486999 259 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 KLRA1P-201ENST00000503499 986 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC006445.2-201ENST00000510061 472 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC010374.2-201ENST00000512933 535 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 MIR3609-201ENST00000582661 80 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC078899.3-201ENST00000599065 212 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 RPL23AP92-201ENST00000603609 255 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 PRELID3BP8-201ENST00000604148 295 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 HSPE1P7-201ENST00000604681 321 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AL133507.1-201ENST00000605269 557 ntBASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF3Q9HD45 AC084824.5-201ENST00000612009 413 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms