Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AP000797.1-201ENST00000478870 387 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 ARL2BPP6-201ENST00000512757 439 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC034159.1-201ENST00000513885 583 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 IGKV2D-36-201ENST00000518643 226 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 MIR544B-201ENST00000582372 78 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AL034351.1-201ENST00000605288 668 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC080013.4-201ENST00000607624 649 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC025594.3-201ENST00000613068 790 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC008121.2-201ENST00000614647 523 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AF127577.6-201ENST00000623352 2191 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC011978.2-201ENST00000569835 2054 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AL356473.1-201ENST00000406203 1408 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 RNA5SP235-201ENST00000365411 114 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 RPL7P60-201ENST00000397636 735 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 MRPS18BP2-201ENST00000434310 759 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 RPL37P21-201ENST00000435890 276 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 NOTCH2P1-201ENST00000443481 624 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC239367.2-201ENST00000447309 705 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC010655.1-201ENST00000449336 292 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 HMGB1P36-201ENST00000487709 576 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC106872.3-201ENST00000495104 446 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 FCF1P3-201ENST00000496394 590 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC023141.12-201ENST00000512399 199 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC007991.1-201ENST00000522680 631 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 HSPA8P13-201ENST00000523715 472 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC091489.2-201ENST00000566263 604 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AGGF1P4-201ENST00000568249 801 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 MIR4425-201ENST00000580572 84 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC083760.1-201ENST00000589621 670 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC087752.4-201ENST00000605911 462 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC090186.1-201ENST00000605991 572 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC099842.1-201ENST00000619919 596 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC093591.3-201ENST00000634516 308 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AL133383.2-201ENST00000622958 2336 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 MTND4P4-201ENST00000439033 1366 ntBASIC3.73□□□□□ -1.81
PCDH9Q9HC56 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
PCDH9Q9HC56 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 U3.39-201ENST00000408569 239 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 RPL17P12-201ENST00000413391 526 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 RPL36AP36-201ENST00000418616 301 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 PSMA6P3-201ENST00000428242 164 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AL445584.1-201ENST00000431451 330 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 MTND1P28-201ENST00000435623 950 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 OR6K1P-201ENST00000456766 971 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 RNA5SP269-201ENST00000459032 137 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC087312.1-201ENST00000471411 480 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms