Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 MIR1183-201ENST00000408856 89 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 CCDC58P2-201ENST00000417131 366 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 TOMM22P1-201ENST00000418578 312 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 RPS27AP14-201ENST00000422868 454 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 FABP3P2-201ENST00000453169 399 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 OR6K1P-201ENST00000456766 971 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 RPL7P23-201ENST00000493874 747 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 OR2A20P-203ENST00000498397 1268 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 SNORA70.14-201ENST00000516205 110 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 RNU6-352P-201ENST00000516908 107 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AC013828.2-201ENST00000532487 235 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AC012435.1-202ENST00000568772 240 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 WISP1-OT1-201ENST00000602893 642 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AC092354.2-201ENST00000607786 514 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AC006023.2-201ENST00000609916 167 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AL590099.1-201ENST00000615276 138 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AP002001.2-201ENST00000529025 1469 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
POLR1BQ9H9Y6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 RNU6-1074P-201ENST00000383995 104 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 RPS29P4-201ENST00000414733 161 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 SYF2P2-201ENST00000417620 583 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 UBE2V1P13-201ENST00000436983 439 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AL512286.1-201ENST00000439244 400 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 MTND1P30-201ENST00000441241 901 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 PRDX3P3-201ENST00000447765 522 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 MTCO3P20-201ENST00000454926 688 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 HMGN2P7-201ENST00000456186 273 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 RPL21P11-201ENST00000461458 483 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 SETP11-201ENST00000473027 690 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AP001086.1-201ENST00000494882 321 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AC096751.1-202ENST00000502691 1067 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 RNU7-143P-201ENST00000516781 65 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 NDUFA5P2-201ENST00000519723 344 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AC023161.2-201ENST00000551218 780 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 MIR3915-201ENST00000578518 97 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AP000403.1-201ENST00000603349 851 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 BCRP9-201ENST00000605312 388 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AC092354.1-201ENST00000606057 376 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 U3.45-201ENST00000607547 219 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AL360181.4-201ENST00000621752 134 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AC079597.1-201ENST00000624306 508 ntBASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
POLR1BQ9H9Y6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 MTND4P16-201ENST00000466108 1367 ntBASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 FRG1BP-201ENST00000278882 761 ntBASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 RNU6-853P-201ENST00000364306 107 ntBASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 U3.20-201ENST00000390909 217 ntBASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 MIR1251-201ENST00000408552 70 ntBASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 RNU2-37P-201ENST00000410695 177 ntBASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 RPL30P2-201ENST00000414021 291 ntBASIC3.76□□□□□ -1.81
POLR1BQ9H9Y6 AL139247.1-201ENST00000422768 325 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms