Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 BTBD10P1-201ENST00000549824 1352 ntBASIC4.39□□□□□ -1.71
SEC61A2Q9H9S3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 LINC01355-201ENST00000566551 5444 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 Y_RNA.28-201ENST00000362554 111 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 RN7SKP95-201ENST00000362860 303 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 MIR568-201ENST00000385036 95 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-278P-201ENST00000390945 109 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AL645733.1-201ENST00000402250 217 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AL121834.1-202ENST00000404494 277 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 RNU2-29P-201ENST00000410423 189 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 RPL6P29-201ENST00000414863 865 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC092162.1-201ENST00000432828 434 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC020550.1-201ENST00000447385 163 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 BTF3P6-201ENST00000448054 499 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC108059.3-201ENST00000456388 214 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 snoU13.7-201ENST00000459220 104 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 MRPS33P2-201ENST00000507850 322 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 SMURF2P1-201ENST00000514992 481 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-988P-201ENST00000519081 107 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 MTND4P7-201ENST00000523876 130 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 OR5D15P-201ENST00000531671 942 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC005868.1-201ENST00000536421 331 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 MIR4703-201ENST00000577728 79 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 MIR4790-201ENST00000577799 79 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 COX6CP3-201ENST00000580869 223 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 MIR4443-201ENST00000585052 53 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 BNIP3P25-201ENST00000596023 559 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AL670379.11-201ENST00000604059 253 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AL670379.10-201ENST00000604330 253 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AL670379.12-201ENST00000605291 253 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AL670379.9-201ENST00000605428 253 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC005014.2-201ENST00000607795 599 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 EIF3FP1-201ENST00000613970 806 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AC007546.1-201ENST00000619452 559 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 AL136313.1-201ENST00000624804 202 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 Z95327.2-201ENST00000414579 1873 ntBASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.38□□□□□ -1.71
SEC61A2Q9H9S3 IRF5P1-201ENST00000504852 2164 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-1243P-201ENST00000364028 107 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 U3.12-201ENST00000364498 214 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 SNORA51.8-201ENST00000384234 132 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-331P-201ENST00000384724 107 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AL592114.1-201ENST00000403842 483 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AF186996.5-201ENST00000418098 904 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 OR2AS1P-201ENST00000427827 319 ntBASIC4.37□□□□□ -1.71
SEC61A2Q9H9S3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms