Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL512649.1-201ENST00000428997 581 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 UBE2FP3-201ENST00000436366 524 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 RPL7P36-201ENST00000444633 681 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 RPL7P31-201ENST00000450192 724 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 RPL26P28-201ENST00000451325 435 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 NDUFA5P7-201ENST00000452914 242 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 FABP3P2-201ENST00000453169 399 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 NANOGP10-201ENST00000453325 895 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 MTCYBP43-201ENST00000513621 740 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 RNU6-488P-201ENST00000515918 99 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 ARL2BPP5-201ENST00000523141 481 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AK6P1-201ENST00000540219 478 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 MIR3944-201ENST00000581277 108 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AC090616.5-202ENST00000582111 297 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AL596327.1-201ENST00000603629 213 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AL365503.1-201ENST00000605247 905 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AL390208.1-201ENST00000605885 644 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AL355816.1-201ENST00000607951 118 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AC007038.2-201ENST00000608095 740 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AC005344.1-201ENST00000613391 459 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AC010133.1-201ENST00000615809 842 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AC027807.2-201ENST00000616099 408 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AC002553.4-201ENST00000616896 331 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AC126177.8-201ENST00000618339 1015 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AL158209.2-201ENST00000619266 216 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 MIR6715B-201ENST00000637172 77 ntBASIC4.06□□□□□ -1.76
EBF3Q9H4W6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.06□□□□□ -1.76
EBF3Q9H4W6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AP004289.2-201ENST00000444413 1457 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 MTND4P12-201ENST00000498999 1377 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 OR5BR1P-201ENST00000524992 1330 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 SNORA63.1-201ENST00000362493 131 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 RNU5F-7P-201ENST00000363696 115 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 Y_RNA.453-201ENST00000384223 109 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AL450338.1-201ENST00000407987 512 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 RPL17P12-201ENST00000413391 526 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 CRYBB2P1-203ENST00000415709 538 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC093698.1-201ENST00000423843 571 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC233728.2-201ENST00000425348 757 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 OR4F13P-201ENST00000428478 931 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC091286.1-201ENST00000431233 461 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 MTND1P11-201ENST00000456661 876 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AP000852.1-201ENST00000472460 573 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC013828.1-201ENST00000481845 158 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 RNU1-95P-201ENST00000516357 160 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 RNU1-128P-201ENST00000516704 160 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AL359697.1-201ENST00000624879 587 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 BDP1P-201ENST00000582658 1990 ntBASIC4.05□□□□□ -1.76
EBF3Q9H4W6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.05□□□□□ -1.76
EBF3Q9H4W6 MARK2P15-201ENST00000432204 2186 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 CASC19-280ENST00000642102 1351 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 CBX3P1-201ENST00000325243 554 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 RNU6-1090P-201ENST00000364065 94 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.04□□□□□ -1.76
EBF3Q9H4W6 RNU6-1122P-201ENST00000384449 107 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 SNORA40.3-201ENST00000390964 122 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 CALM2P3-201ENST00000400429 449 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 SNORA11.1-201ENST00000408133 129 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AIMP1P1-201ENST00000418670 937 ntBASIC4.04□□□□□ -1.76
EBF3Q9H4W6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms