Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MSL3P1-202ENST00000440028 1468 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 GABPAP-201ENST00000419271 1356 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 Y_RNA.273-201ENST00000364703 102 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 RNU6-1303P-201ENST00000364841 107 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 Y_RNA.458-201ENST00000384240 102 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 Y_RNA.541-201ENST00000384640 113 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 RNU6-1135P-201ENST00000411083 103 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 RPL19P1-201ENST00000411635 428 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 AL732292.1-201ENST00000426692 226 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 RPL35AP22-201ENST00000436855 335 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 AC112498.1-201ENST00000444401 332 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 AL513124.1-201ENST00000450410 614 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 AC140172.1-201ENST00000502928 141 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 AC093853.1-201ENST00000515689 483 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 MIR4300-201ENST00000581016 96 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 RPL23AP92-201ENST00000603609 255 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 MIR376A1-201ENST00000616574 68 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 CYP3A51P-201ENST00000633513 256 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 MIR4679-1-201ENST00000637619 75 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.59□□□□□ -1.51
COL25A1Q9BXS0 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.59□□□□□ -1.52
COL25A1Q9BXS0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
COL25A1Q9BXS0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
COL25A1Q9BXS0 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.59□□□□□ -1.52
COL25A1Q9BXS0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
COL25A1Q9BXS0 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 AP000560.1-201ENST00000624150 1937 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 AC009643.2-201ENST00000603543 1448 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 RNU6-715P-201ENST00000365204 103 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 Y_RNA.497-201ENST00000384447 98 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 DBIP1-201ENST00000401435 260 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 RN7SKP100-201ENST00000411258 284 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 AL713922.1-201ENST00000416477 747 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 CBX1P4-201ENST00000439415 457 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 AC006427.1-201ENST00000514359 712 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 LSM6P2-201ENST00000552208 177 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 AC136932.1-201ENST00000574771 208 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 MIR3944-201ENST00000581277 108 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 AC006363.1-201ENST00000603806 463 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 CYCSP1-201ENST00000604815 315 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 AC007619.2-201ENST00000605743 379 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 ZYXP1-201ENST00000617638 118 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 AC022031.1-201ENST00000585985 2593 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.58□□□□□ -1.52
COL25A1Q9BXS0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 RNA5SP205-201ENST00000364653 136 ntBASIC5.57□□□□□ -1.52
COL25A1Q9BXS0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms