Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 RPS4XP4-201ENST00000443195 763 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AL121871.1-201ENST00000443413 436 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 SNORD108-201ENST00000459332 71 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 RN7SL691P-201ENST00000494487 301 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 ARL4AP2-201ENST00000507378 601 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 FTH1P9-201ENST00000513251 355 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 SNORA18.6-201ENST00000516792 115 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AC022616.6-201ENST00000520479 119 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AC103783.1-201ENST00000520506 373 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AP000907.2-201ENST00000530827 353 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 CR383656.7-201ENST00000548164 174 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 DYNLL1P4-201ENST00000549314 266 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 LSM3P2-201ENST00000551246 273 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AC060771.1-201ENST00000582031 164 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 PRPF19P1-201ENST00000584766 898 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AC010680.3-201ENST00000604215 520 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AL034408.1-202ENST00000636088 415 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AC000374.1-201ENST00000434698 1745 ntBASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.51□□□□□ -1.69
LRFN3Q9BTN0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 RNU6-1090P-201ENST00000364065 94 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 MT-TD-201ENST00000387419 68 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 MTCO3P40-201ENST00000392516 676 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 CALM2P3-201ENST00000400429 449 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AL122016.1-201ENST00000403365 367 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 HMGN1P24-201ENST00000412282 298 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 C1DP2-201ENST00000418167 426 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AL137014.1-201ENST00000420490 1226 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 ELOCP14-201ENST00000428070 331 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AC073464.1-201ENST00000429823 534 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 RPL23AP52-201ENST00000439311 478 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 ELOCP7-201ENST00000439968 331 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AC019235.1-201ENST00000503847 207 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AC108078.1-201ENST00000508073 725 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 Y_RNA.672-201ENST00000516289 104 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 RNA5SP49-201ENST00000516450 115 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 RNU6-1153P-201ENST00000516760 105 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 RNU6-430P-201ENST00000517078 107 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AP005639.2-201ENST00000527592 928 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AP003497.1-201ENST00000528472 562 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AC123904.3-201ENST00000547218 814 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AL161729.3-201ENST00000603533 673 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AL359880.1-201ENST00000621879 266 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 MTCO1P9-201ENST00000505577 1534 ntBASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.5□□□□□ -1.69
LRFN3Q9BTN0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 AL157700.1-201ENST00000561973 1432 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 RNU6-1249P-201ENST00000363237 111 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 RNU6-263P-201ENST00000363811 107 ntBASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LRFN3Q9BTN0 RNU6-780P-201ENST00000391030 104 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms