Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PAAF1Q9BRP4 AC011266.1-201ENST00000624119 3569 ntBASIC4.09□□□□□ -1.76
PAAF1Q9BRP4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PAAF1Q9BRP4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PAAF1Q9BRP4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.09□□□□□ -1.76
PAAF1Q9BRP4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.09□□□□□ -1.76
PAAF1Q9BRP4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 RNU6-1249P-201ENST00000363237 111 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 RNA5SP51-201ENST00000364750 119 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 RNA5SP146-201ENST00000410743 123 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC092447.6-201ENST00000414578 210 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 C1DP2-201ENST00000418167 426 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC068533.1-201ENST00000418542 415 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC006946.1-201ENST00000429106 328 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 EZH2P1-201ENST00000431167 291 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 ARPC3P1-201ENST00000437218 533 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 SNORA71B-202ENST00000439232 272 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 RABEPKP1-201ENST00000440529 1026 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 MTND6P13-201ENST00000443510 523 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 SRRM1P2-201ENST00000464531 1192 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC104619.4-201ENST00000510773 249 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 RNA5SP208-201ENST00000516156 78 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 RNU6-201P-201ENST00000517100 61 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC022616.6-201ENST00000520479 119 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 SETP7-201ENST00000552169 453 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 MIR3913-1-201ENST00000577744 102 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 MIR5187-201ENST00000583479 76 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 CKS1BP3-201ENST00000600888 237 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC090578.1-201ENST00000604955 591 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 RNU6-87P-201ENST00000607561 108 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC091834.1-201ENST00000614543 472 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC072046.2-201ENST00000618366 268 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 AC011460.1-201ENST00000636268 1834 ntBASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.08□□□□□ -1.76
PAAF1Q9BRP4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 MTCO1P9-201ENST00000505577 1534 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 RNU6-114P-201ENST00000384704 105 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 RPL7P25-201ENST00000404151 721 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 CCNG1P1-201ENST00000406783 885 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 RNU6-248P-201ENST00000410720 107 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 RPS3AP44-201ENST00000425466 790 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC010975.2-201ENST00000427781 588 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 OR2B8P-201ENST00000432841 938 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 MTND4LP10-201ENST00000435146 291 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AL031667.1-201ENST00000440222 725 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC104308.1-201ENST00000454621 333 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 TMED11P-201ENST00000479478 690 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC012170.1-201ENST00000495139 359 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AL358832.1-201ENST00000497800 389 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC022882.1-201ENST00000532142 501 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 CR383656.7-201ENST00000548164 174 ntBASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.07□□□□□ -1.76
PAAF1Q9BRP4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms