Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.62□□□□□ -1.99
VAT1Q99536 AADACP1-206ENST00000561502 1193 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 LARP7P3-201ENST00000579888 337 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 DUXAP4-201ENST00000603046 613 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AP000787.2-201ENST00000604432 568 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AC073387.2-201ENST00000604797 784 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AC100814.1-201ENST00000606963 623 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AC009570.1-201ENST00000609599 745 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AC091046.2-201ENST00000620775 665 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AC106730.3-201ENST00000624568 641 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 AP000676.4-201ENST00000624659 623 ntBASIC2.62□□□□□ -1.99
VAT1Q99536 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.62□□□□□ -1.99
VAT1Q99536 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.62□□□□□ -1.99
VAT1Q99536 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
VAT1Q99536 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.61□□□□□ -1.99
VAT1Q99536 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.61□□□□□ -1.99
VAT1Q99536 CD24P4-201ENST00000382840 243 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 SNORD65C-201ENST00000390962 71 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 MTND4P13-201ENST00000402078 1023 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 UBE2V1P15-201ENST00000407776 448 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 AL023807.1-201ENST00000407932 359 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.61□□□□□ -1.99
VAT1Q99536 AC092447.6-201ENST00000414578 210 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 AC080125.1-201ENST00000414888 684 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 AC008173.1-201ENST00000418901 264 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 AC099677.1-201ENST00000420575 175 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.61□□□□□ -1.99
VAT1Q99536 MTND2P19-201ENST00000449129 1012 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 TRBV26-201ENST00000456572 344 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 NAP1L1P3-201ENST00000462291 880 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 RPL21P47-201ENST00000483696 477 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 MLLT10P2-201ENST00000506434 249 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.61□□□□□ -1.99
VAT1Q99536 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.61□□□□□ -1.99
VAT1Q99536 AC026801.2-201ENST00000515352 425 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 PRELID3BP4-201ENST00000515476 571 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 AP000916.1-201ENST00000533869 835 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 AC018630.1-201ENST00000541376 925 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.61□□□□□ -1.99
VAT1Q99536 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.61□□□□□ -1.99
VAT1Q99536 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.61□□□□□ -1.99
VAT1Q99536 AC106900.2-201ENST00000604994 317 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 RPL23AP88-201ENST00000605759 454 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 MIR7106-201ENST00000612419 65 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 VN1R9P-201ENST00000614184 867 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 AC004696.1-201ENST00000614345 607 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 AP006248.3-201ENST00000623580 594 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
VAT1Q99536 AC092608.2-201ENST00000624427 218 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 BX649567.1-201ENST00000642071 1134 ntBASIC2.61□□□□□ -1.99
VAT1Q99536 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VAT1Q99536 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VAT1Q99536 SGO1P1-201ENST00000603525 1447 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.6□□□□□ -1.99
VAT1Q99536 RNU6-619P-201ENST00000365146 108 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 SNORD82-201ENST00000365530 70 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VAT1Q99536 MIR16-1-201ENST00000385271 89 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 RPL19P1-201ENST00000411635 428 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 ATG3P1-201ENST00000419507 911 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 AL606495.1-201ENST00000422100 813 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.6□□□□□ -1.99
VAT1Q99536 AC012497.1-201ENST00000429392 575 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 RPS4XP6-201ENST00000477670 797 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 VN1R104P-201ENST00000505115 1009 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.6□□□□□ -1.99
VAT1Q99536 AC010468.3-201ENST00000508225 458 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VAT1Q99536 HMGB1P41-201ENST00000520234 440 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 OR4P1P-201ENST00000530808 1136 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 OSBPL9P3-201ENST00000534523 595 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 NIFKP8-201ENST00000560500 874 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 AC074050.1-201ENST00000563247 211 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 FAM60BP-201ENST00000578364 658 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 MIR3670-2-201ENST00000582974 65 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 MIR3670-1-201ENST00000584160 65 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 MIR3670-3-201ENST00000584855 65 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.6□□□□□ -1.99
VAT1Q99536 VN1R92P-201ENST00000598511 928 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 AC133794.1-201ENST00000602731 914 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 MIR3670-4-201ENST00000612260 65 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 AC009318.4-201ENST00000620496 486 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 AL353748.2-201ENST00000622148 471 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VAT1Q99536 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VAT1Q99536 AL136520.1-201ENST00000600311 1322 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 MTND4P21-201ENST00000453886 1357 ntBASIC2.6□□□□□ -1.99
VAT1Q99536 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -1.99
VAT1Q99536 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VAT1Q99536 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VAT1Q99536 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VAT1Q99536 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VAT1Q99536 RNA5SP456-201ENST00000364002 114 ntBASIC2.59□□□□□ -1.99
VAT1Q99536 RNU6-650P-201ENST00000365658 111 ntBASIC2.59□□□□□ -1.99
VAT1Q99536 U3.29-201ENST00000391296 212 ntBASIC2.59□□□□□ -1.99
VAT1Q99536 AL121978.1-201ENST00000402778 359 ntBASIC2.59□□□□□ -1.99
VAT1Q99536 RNU4-27P-201ENST00000410889 139 ntBASIC2.59□□□□□ -1.99
VAT1Q99536 AL158050.1-201ENST00000416077 457 ntBASIC2.59□□□□□ -1.99
VAT1Q99536 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.59□□□□□ -1.99
VAT1Q99536 MTCO3P43-201ENST00000440974 771 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms