Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 RN7SL561P-201ENST00000488553 281 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 MIR4776-2-201ENST00000580204 80 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 AC098826.3-201ENST00000603823 466 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 HSPA8P1-201ENST00000425843 1833 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 AC011504.1-201ENST00000623331 4103 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.18□□□□□ -1.42
PHOX2BQ99453 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.18□□□□□ -1.42
PHOX2BQ99453 AC068769.1-201ENST00000474767 2426 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PHOX2BQ99453 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.18□□□□□ -1.42
PHOX2BQ99453 RNU6-187P-201ENST00000384139 106 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 MIR190B-201ENST00000401119 79 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 RNA5SP494-201ENST00000410653 129 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 AL513331.1-201ENST00000411908 397 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 AL451062.2-201ENST00000427515 271 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 AC098831.1-201ENST00000440661 216 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 KNOP1P3-201ENST00000446933 426 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.18□□□□□ -1.42
PHOX2BQ99453 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.18□□□□□ -1.42
PHOX2BQ99453 snoU13.3-201ENST00000459441 104 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 AC092865.4-201ENST00000477936 615 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 RPSAP50-201ENST00000481955 852 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 RPS4XP1-201ENST00000482189 787 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 RN7SL714P-201ENST00000487050 298 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 AL359273.1-201ENST00000510918 627 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.18□□□□□ -1.42
PHOX2BQ99453 AP002392.1-201ENST00000537692 208 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 SYF2P1-201ENST00000550658 413 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 TRAV37-201ENST00000553906 342 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 AC005224.3-201ENST00000584683 2140 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 AC009314.1-201ENST00000603871 304 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 Z99571.1-201ENST00000636677 394 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.18□□□□□ -1.42
PHOX2BQ99453 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PHOX2BQ99453 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PHOX2BQ99453 AC107027.3-201ENST00000565095 3473 ntBASIC6.18□□□□□ -1.42
PHOX2BQ99453 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
PHOX2BQ99453 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PHOX2BQ99453 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PHOX2BQ99453 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PHOX2BQ99453 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PHOX2BQ99453 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PHOX2BQ99453 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 SNORD16-201ENST00000362803 99 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 RNA5SP65-201ENST00000363166 119 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 RNA5SP240-201ENST00000365355 128 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 RNU6-708P-201ENST00000384217 107 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 RNY3P4-201ENST00000384428 101 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 RNU6-882P-201ENST00000391025 103 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 BMS1P17-202ENST00000416720 316 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 TOMM20P4-201ENST00000427861 435 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 AC087650.1-201ENST00000431445 468 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 BX679664.1-201ENST00000434429 253 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 FTLP8-201ENST00000446770 267 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 IGHV5-78-201ENST00000450948 295 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 RN7SL346P-201ENST00000491561 294 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 RPS24P16-201ENST00000497294 392 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 SERF1AP1-201ENST00000514575 187 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 AC008489.1-201ENST00000524271 483 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms