Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC009464.1-201ENST00000615731 469 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 AC009318.4-201ENST00000620496 486 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 AP002791.1-201ENST00000623291 381 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 U6.101-201ENST00000637707 76 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEK1Q96PY6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NEK1Q96PY6 AC093908.1-201ENST00000623125 8092 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NEK1Q96PY6 OR5BR1P-201ENST00000524992 1330 ntBASIC3.89□□□□□ -1.79
NEK1Q96PY6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NEK1Q96PY6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEK1Q96PY6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEK1Q96PY6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 Z83843.1-201ENST00000604070 3685 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NEK1Q96PY6 MIR128-1-201ENST00000384921 82 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 RNA5SP56-201ENST00000410277 118 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 RNA5SP229-201ENST00000410809 99 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 RNA5SP107-201ENST00000411358 122 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 RPS7P13-201ENST00000413955 498 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC005005.2-201ENST00000420779 380 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 RPS25P9-201ENST00000435591 252 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC005019.1-201ENST00000436455 431 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC127537.2-201ENST00000439258 465 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC115115.1-201ENST00000449927 248 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 RPL18AP17-201ENST00000455326 198 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 snoU13.3-201ENST00000459441 104 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 VN1R17P-201ENST00000472048 1090 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 RN7SL442P-201ENST00000473804 320 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 SNORA3.4-201ENST00000515969 96 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 RNU6-583P-201ENST00000516012 92 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 RN7SKP289-201ENST00000517244 295 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEK1Q96PY6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 SNRPGP15-201ENST00000600149 222 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 VN1R82P-201ENST00000601481 356 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 AL031281.1-201ENST00000604049 488 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC124312.4-201ENST00000605533 310 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC243773.3-201ENST00000613270 256 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC073476.4-201ENST00000628409 72 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 MIR1322-201ENST00000638013 71 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEK1Q96PY6 RIOK3P1-201ENST00000418778 1528 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.88□□□□□ -1.79
NEK1Q96PY6 AC092326.2-201ENST00000624772 1561 ntBASIC3.88□□□□□ -1.79
NEK1Q96PY6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEK1Q96PY6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEK1Q96PY6 AL672296.1-201ENST00000427780 2158 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEK1Q96PY6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 RNU6-335P-201ENST00000364563 113 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 RNU6-621P-201ENST00000364752 109 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 RNU6-339P-201ENST00000384310 107 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 Y_RNA.493-201ENST00000384422 102 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 Y_RNA.500-201ENST00000384466 111 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 U3.19-201ENST00000390893 196 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 AIMP1P1-201ENST00000418670 937 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 OR1AA1P-201ENST00000419597 916 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 AC005326.1-201ENST00000429197 123 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 MTND1P32-201ENST00000433043 938 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 AC236972.1-201ENST00000433225 199 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 AL591503.2-201ENST00000442314 1005 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 Z99127.3-201ENST00000448158 395 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 HMGN2P16-201ENST00000456802 261 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NEK1Q96PY6 RPL23AP55-201ENST00000498163 452 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 XKRY-201ENST00000510392 1100 ntBASIC3.87□□□□□ -1.79
NEK1Q96PY6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.87□□□□□ -1.79
NEK1Q96PY6 AC012182.1-201ENST00000570133 895 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms