Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC42Q96M95 XKRY-201ENST00000510392 1100 ntBASIC2.52□□□□□ -2.01
CCDC42Q96M95 CDC42P4-201ENST00000510507 563 ntBASIC2.52□□□□□ -2.01
CCDC42Q96M95 RAC1P5-201ENST00000512182 576 ntBASIC2.52□□□□□ -2.01
CCDC42Q96M95 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC42Q96M95 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC42Q96M95 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC42Q96M95 AP000889.2-201ENST00000532684 490 ntBASIC2.52□□□□□ -2.01
CCDC42Q96M95 AP005205.1-201ENST00000563503 508 ntBASIC2.52□□□□□ -2.01
CCDC42Q96M95 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC42Q96M95 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC42Q96M95 CBX3P2-202ENST00000583365 535 ntBASIC2.52□□□□□ -2.01
CCDC42Q96M95 VN1R92P-201ENST00000598511 928 ntBASIC2.52□□□□□ -2.01
CCDC42Q96M95 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC42Q96M95 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC42Q96M95 AL356118.1-201ENST00000635272 1078 ntBASIC2.52□□□□□ -2.01
CCDC42Q96M95 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC42Q96M95 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC42Q96M95 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CCDC42Q96M95 AC244517.1-201ENST00000606030 2086 ntBASIC2.52□□□□□ -2.01
CCDC42Q96M95 AC016717.2-201ENST00000609089 5141 ntBASIC2.52□□□□□ -2.01
CCDC42Q96M95 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC42Q96M95 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC42Q96M95 AL139276.1-201ENST00000311910 1001 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 MIR196B-201ENST00000384852 84 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 SNORA48.2-201ENST00000390926 124 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC42Q96M95 AL137014.1-201ENST00000420490 1226 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC42Q96M95 AL451062.2-201ENST00000427515 271 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC42Q96M95 RPS4XP6-201ENST00000477670 797 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 AC023424.2-201ENST00000493479 777 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 MTND3P24-201ENST00000506306 329 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC42Q96M95 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 TTC39CP1-201ENST00000512513 755 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 RNU6-889P-201ENST00000517189 103 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 RN7SKP40-201ENST00000517211 242 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 AP001804.3-201ENST00000525146 880 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 AC007115.1-201ENST00000546853 234 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 AC079610.2-201ENST00000604818 690 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 AC004775.1-201ENST00000607389 753 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 AL513477.2-201ENST00000607858 568 ntBASIC2.51□□□□□ -2.01
CCDC42Q96M95 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC42Q96M95 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC42Q96M95 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC42Q96M95 FNDC3CP-201ENST00000420795 1155 ntBASIC2.5□□□□□ -2.01
CCDC42Q96M95 RPL7P44-201ENST00000424827 742 ntBASIC2.5□□□□□ -2.01
CCDC42Q96M95 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC42Q96M95 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC42Q96M95 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC42Q96M95 AC107222.1-201ENST00000510899 637 ntBASIC2.5□□□□□ -2.01
CCDC42Q96M95 HMGB1P46-201ENST00000520062 610 ntBASIC2.5□□□□□ -2.01
CCDC42Q96M95 UBTFL10-201ENST00000528532 562 ntBASIC2.5□□□□□ -2.01
CCDC42Q96M95 AC018630.1-201ENST00000541376 925 ntBASIC2.5□□□□□ -2.01
CCDC42Q96M95 AC121758.2-201ENST00000553271 193 ntBASIC2.5□□□□□ -2.01
CCDC42Q96M95 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.5□□□□□ -2.01
CCDC42Q96M95 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC42Q96M95 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC42Q96M95 AC106900.2-201ENST00000604994 317 ntBASIC2.5□□□□□ -2.01
CCDC42Q96M95 AC068620.4-201ENST00000636730 1182 ntBASIC2.5□□□□□ -2.01
CCDC42Q96M95 MTND2P41-201ENST00000637599 773 ntBASIC2.5□□□□□ -2.01
CCDC42Q96M95 ZNF833P-201ENST00000424938 1494 ntBASIC2.5□□□□□ -2.01
CCDC42Q96M95 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
CCDC42Q96M95 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CCDC42Q96M95 ZNF720P1-201ENST00000562403 1939 ntBASIC2.49□□□□□ -2.01
CCDC42Q96M95 RNU6-7-201ENST00000364784 107 ntBASIC2.49□□□□□ -2.01
CCDC42Q96M95 RNU6-8-201ENST00000365467 107 ntBASIC2.49□□□□□ -2.01
CCDC42Q96M95 OR5H15-201ENST00000383696 930 ntBASIC2.49□□□□□ -2.01
CCDC42Q96M95 RNU6-821P-201ENST00000390995 107 ntBASIC2.49□□□□□ -2.01
CCDC42Q96M95 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC42Q96M95 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC42Q96M95 AL512504.1-201ENST00000415494 778 ntBASIC2.49□□□□□ -2.01
CCDC42Q96M95 MTATP6P11-201ENST00000428071 670 ntBASIC2.49□□□□□ -2.01
CCDC42Q96M95 AC079780.1-201ENST00000428259 207 ntBASIC2.49□□□□□ -2.01
CCDC42Q96M95 RPS15AP28-201ENST00000435088 386 ntBASIC2.49□□□□□ -2.01
CCDC42Q96M95 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC42Q96M95 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC42Q96M95 UBE2V1P5-201ENST00000440070 405 ntBASIC2.49□□□□□ -2.01
CCDC42Q96M95 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.49□□□□□ -2.01
CCDC42Q96M95 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC42Q96M95 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.49□□□□□ -2.01
CCDC42Q96M95 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC42Q96M95 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC42Q96M95 AC002456.2-201ENST00000509356 380 ntBASIC2.49□□□□□ -2.01
CCDC42Q96M95 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC42Q96M95 PRELID3BP4-201ENST00000515476 571 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms