Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AL162389.1-201ENST00000449233 177 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC011276.1-201ENST00000469688 323 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC138Q96M89 RPS4XP13-201ENST00000483219 789 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC138Q96M89 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC138Q96M89 FTH1P21-201ENST00000512179 511 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 ERHP1-201ENST00000523006 310 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 TRAV8-5-201ENST00000537369 341 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC006064.5-201ENST00000541782 248 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 MIR4697-201ENST00000582977 78 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 AL356218.2-201ENST00000605264 187 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 AL031666.3-201ENST00000609320 1006 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 MIR378J-201ENST00000611988 109 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC138932.5-201ENST00000617759 563 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC007546.1-201ENST00000619452 559 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC095031.1-201ENST00000623685 672 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC092104.1-201ENST00000497346 1441 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC138Q96M89 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC138Q96M89 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC138Q96M89 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC138Q96M89 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC138Q96M89 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC138Q96M89 SNORA23-201ENST00000365128 182 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 Y_RNA.359-201ENST00000365498 102 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 RNU6-348P-201ENST00000384386 107 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC138Q96M89 DEFB108C-201ENST00000400154 252 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 RNU6-248P-201ENST00000410720 107 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 RNU2-62P-201ENST00000410868 191 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 RPL18P10-201ENST00000425606 538 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 AL157831.1-201ENST00000426134 473 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 AL589872.1-201ENST00000426602 288 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 AC244505.5-201ENST00000443639 207 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 RNA5SP73-201ENST00000516744 108 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC138Q96M89 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 BDH2P1-201ENST00000602288 736 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 AC015871.2-201ENST00000603605 948 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 AL354984.3-201ENST00000604803 325 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 AC090578.1-201ENST00000604955 591 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 AC109347.2-201ENST00000610220 349 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 AC024941.1-201ENST00000612250 334 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 HULC.1-201ENST00000612720 240 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 uc_338.12-201ENST00000616344 181 ntBASIC4.18□□□□□ -1.74
CCDC138Q96M89 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC138Q96M89 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC138Q96M89 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC138Q96M89 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC138Q96M89 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC138Q96M89 FARSBP1-201ENST00000435808 1778 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC138915.3-201ENST00000562908 1389 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 GNG5P1-201ENST00000255500 204 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 RNY4P16-201ENST00000364768 94 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 RNY4P34-201ENST00000364779 95 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 AL138878.1-201ENST00000405131 347 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 SNORA11-201ENST00000408789 128 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 RN7SKP159-201ENST00000410657 292 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 AL663109.1-201ENST00000411498 844 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 ELOCP17-201ENST00000414751 326 ntBASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC138Q96M89 AC093156.1-201ENST00000440382 670 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms