Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC131902.3-201ENST00000611767 581 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 KPNA2P2-201ENST00000419546 1489 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AC006378.2-201ENST00000623178 2476 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 AL022578.1-201ENST00000439330 1433 ntBASIC4.29□□□□□ -1.72
CCDC17Q96LX7 XPOTP1-201ENST00000443317 2398 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC007823.1-201ENST00000569932 1566 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 MIR208A-201ENST00000362287 71 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 SNORD46.1-201ENST00000364139 104 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 SNORA51.6-201ENST00000384151 125 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC016769.3-201ENST00000396562 315 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 MIR320C1-201ENST00000408566 88 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC109583.1-201ENST00000432156 268 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AL353748.1-201ENST00000440753 474 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 PRDX3P3-201ENST00000447765 522 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AL590365.1-201ENST00000450788 243 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AL121877.1-201ENST00000453704 622 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 OR6K1P-201ENST00000456766 971 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 RPL31P50-201ENST00000471002 296 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 RPL30P11-201ENST00000495304 339 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC090281.1-201ENST00000523019 276 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC009977.1-201ENST00000586015 570 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 BNIP3P8-201ENST00000597863 560 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC090578.1-201ENST00000604955 591 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC015813.4-201ENST00000610469 179 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AC012314.7-201ENST00000619693 93 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 AL365440.1-201ENST00000436135 2167 ntBASIC4.28□□□□□ -1.72
CCDC17Q96LX7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC17Q96LX7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.73
CCDC17Q96LX7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 AC090337.1-201ENST00000579651 2074 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 MIR448-201ENST00000362131 111 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 SNORA70.4-201ENST00000365509 134 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 RNU6-769P-201ENST00000384407 104 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 RNU6-809P-201ENST00000384461 107 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 MTHFD2P2-201ENST00000407725 247 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 TPMTP2-201ENST00000414372 726 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 RPS7P15-201ENST00000415804 584 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 HMGB3P20-201ENST00000417997 600 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 AL513174.1-201ENST00000423182 629 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 UBE2V1P8-201ENST00000437166 265 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 RPL23AP16-201ENST00000441715 421 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC17Q96LX7 AC003071.1-201ENST00000451219 789 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 RBMY2UP-201ENST00000453474 324 ntBASIC4.27□□□□□ -1.73
CCDC17Q96LX7 AC027673.1-201ENST00000456245 405 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms