Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 COX7A2P2-201ENST00000505291 250 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC023141.12-201ENST00000512399 199 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 RNU6-718P-201ENST00000516166 105 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 Y_RNA.672-201ENST00000516289 104 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 RNU6-314P-201ENST00000516574 104 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 AP003497.1-201ENST00000528472 562 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS50Q96JG6 CCNG2P1-201ENST00000549521 1000 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC006960.3-201ENST00000561845 705 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 RPL23AP97-201ENST00000568955 471 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC079587.1-201ENST00000603846 277 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC006329.2-201ENST00000611491 394 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC114781.5-201ENST00000615297 108 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AL158209.2-201ENST00000619266 216 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC136475.10-201ENST00000620253 385 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC009268.2-201ENST00000621925 457 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS50Q96JG6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS50Q96JG6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 RNU6-97P-201ENST00000363387 104 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 RPL17P50-201ENST00000396131 546 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 RPL23AP26-201ENST00000412728 464 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 EIF1P1-201ENST00000421436 341 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 RPL23AP38-201ENST00000423801 469 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 EZH2P1-201ENST00000431167 291 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC104850.1-201ENST00000435940 476 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC114755.5-201ENST00000447760 831 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 NUTF2P3-201ENST00000448540 384 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 ABCF2P2-201ENST00000450549 296 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC104308.1-201ENST00000454621 333 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 MTCO3P20-201ENST00000454926 688 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 RPL38P1-201ENST00000460914 211 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC004924.1-201ENST00000480160 781 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC108145.1-201ENST00000503770 153 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC108078.1-201ENST00000508073 725 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 SNORA31.9-201ENST00000516429 84 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC134698.4-201ENST00000523451 826 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 OR4P1P-201ENST00000530808 1136 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC006270.2-201ENST00000578523 652 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 MIR3118-1-201ENST00000581787 76 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 RBM11P1-201ENST00000604951 799 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 MIR432-201ENST00000606207 94 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC012603.1-201ENST00000606424 528 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 RNU6-87P-201ENST00000607561 108 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC072046.2-201ENST00000618366 268 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 MIR3653-201ENST00000625572 110 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 AC010149.2-201ENST00000637608 315 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS50Q96JG6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS50Q96JG6 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.13□□□□□ -1.75
VPS50Q96JG6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS50Q96JG6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS50Q96JG6 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS50Q96JG6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS50Q96JG6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 PABPC1P7-201ENST00000413177 1513 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS50Q96JG6 AC126755.2-208ENST00000327792 462 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 AC138969.1-213ENST00000331436 462 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 RNA5SP175-201ENST00000364275 119 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 RNU6-761P-201ENST00000384148 107 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 AL353777.1-201ENST00000425552 326 ntBASIC4.12□□□□□ -1.75
VPS50Q96JG6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS50Q96JG6 RPL31P35-201ENST00000431058 377 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms