Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HPS1Q92902 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HPS1Q92902 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HPS1Q92902 AL022311.1-201ENST00000623726 19416 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HPS1Q92902 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.65□□□□□ -1.5
HPS1Q92902 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS1Q92902 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HPS1Q92902 AC004076.2-201ENST00000620532 3323 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HPS1Q92902 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HPS1Q92902 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
HPS1Q92902 AL591135.1-201ENST00000401578 5914 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 SAMMSON-226ENST00000642089 1582 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HPS1Q92902 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.65□□□□□ -1.5
HPS1Q92902 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HPS1Q92902 RNU6-834P-201ENST00000362367 110 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 RNU1-130P-201ENST00000363930 160 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HPS1Q92902 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HPS1Q92902 HSPE1P8-201ENST00000406997 288 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 U3.35-201ENST00000408405 208 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 RNU4-65P-201ENST00000410473 140 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.65□□□□□ -1.5
HPS1Q92902 BX323845.3-201ENST00000428215 527 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS1Q92902 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.65□□□□□ -1.5
HPS1Q92902 AC118758.1-202ENST00000454719 225 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 RNU6-1037P-201ENST00000459571 107 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.65□□□□□ -1.5
HPS1Q92902 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.65□□□□□ -1.5
HPS1Q92902 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.65□□□□□ -1.5
HPS1Q92902 RN7SKP60-201ENST00000516985 239 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 RNA5SP400-201ENST00000517155 111 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.65□□□□□ -1.5
HPS1Q92902 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.65□□□□□ -1.5
HPS1Q92902 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.65□□□□□ -1.5
HPS1Q92902 TXNP4-201ENST00000575018 310 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 LRRC37A5P-203ENST00000580181 585 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.65□□□□□ -1.5
HPS1Q92902 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 TUG1_2.1-201ENST00000614234 87 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 SNORD39.4-201ENST00000620099 78 ntBASIC5.65□□□□□ -1.5
HPS1Q92902 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.51
HPS1Q92902 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HPS1Q92902 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.65□□□□□ -1.51
HPS1Q92902 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.65□□□□□ -1.51
HPS1Q92902 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
HPS1Q92902 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.65□□□□□ -1.51
HPS1Q92902 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HPS1Q92902 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
HPS1Q92902 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HPS1Q92902 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HPS1Q92902 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HPS1Q92902 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HPS1Q92902 AC105235.1-201ENST00000623208 1816 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HPS1Q92902 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HPS1Q92902 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HPS1Q92902 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HPS1Q92902 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HPS1Q92902 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HPS1Q92902 RNA5SP140-201ENST00000364524 92 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 RNA5SP85-201ENST00000365378 119 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 RNA5SP187-201ENST00000384400 119 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 SNORD78.2-201ENST00000391076 69 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.64□□□□□ -1.51
HPS1Q92902 Y_RNA.623-201ENST00000411128 95 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS1Q92902 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HPS1Q92902 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS1Q92902 LINC00328-2P-201ENST00000436585 219 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS1Q92902 AC127537.2-201ENST00000439258 465 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS1Q92902 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS1Q92902 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HPS1Q92902 RN7SKP210-201ENST00000459176 261 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 AC010326.1-201ENST00000462726 602 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 RPS27P20-201ENST00000492051 246 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 AC005912.1-201ENST00000495392 255 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 AC093840.1-201ENST00000511599 336 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.64□□□□□ -1.51
HPS1Q92902 RNU4-57P-201ENST00000515980 135 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HPS1Q92902 AC139365.2-201ENST00000517972 253 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.64□□□□□ -1.51
HPS1Q92902 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
HPS1Q92902 RPL29P33-201ENST00000587474 316 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 AC067852.3-201ENST00000589177 561 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.64□□□□□ -1.51
HPS1Q92902 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.64□□□□□ -1.51
HPS1Q92902 SNORD113-5-201ENST00000607261 78 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
HPS1Q92902 AC024255.1-201ENST00000614376 102 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 MIR6806-201ENST00000622141 64 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 AC089999.3-201ENST00000622440 577 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 Z99571.1-201ENST00000636677 394 ntBASIC5.64□□□□□ -1.51
HPS1Q92902 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms