Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC096586.1-201ENST00000610267 561 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 RPL21P132-201ENST00000331267 462 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 SNORD114-1-201ENST00000362705 72 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 RNU6-666P-201ENST00000363499 107 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AL158050.1-201ENST00000416077 457 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 HSFY7P-201ENST00000432672 318 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC018634.1-201ENST00000437554 401 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 HSFY8P-201ENST00000437934 318 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC097499.1-201ENST00000444277 208 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 HSFY5P-201ENST00000453726 309 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC012254.4-201ENST00000588843 273 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 MTATP6P2-201ENST00000603319 678 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 AC079228.1-201ENST00000624774 1049 ntBASIC2.45□□□□□ -2.02
SHROOM3Q8TF72 MTND5P11-201ENST00000511037 1812 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 MTCO1P18-201ENST00000455518 1419 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 Y_RNA.269-201ENST00000364685 89 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 RNU6-185P-201ENST00000384421 107 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 RNA5SP181-201ENST00000410246 98 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 TATDN1P1-201ENST00000414123 891 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 TRIAP1P1-201ENST00000427062 225 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 SDR42E1P3-201ENST00000438345 502 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 MOB1AP2-201ENST00000446060 614 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 AL354710.1-201ENST00000453641 246 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 MTND3P3-201ENST00000505004 126 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 AC107222.1-201ENST00000510899 637 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 RNA5SP309-201ENST00000516670 106 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 IGKV2-36-201ENST00000519999 223 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 AC068339.2-201ENST00000534395 618 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 AC009063.1-201ENST00000563342 702 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 AC055764.2-201ENST00000610089 670 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 VN1R9P-201ENST00000614184 867 ntBASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.44□□□□□ -2.02
SHROOM3Q8TF72 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 RNU6-354P-201ENST00000383862 107 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 RNU6-76P-201ENST00000384060 104 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 RNU6-610P-201ENST00000384264 107 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 RN7SKP140-201ENST00000411196 284 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC009965.2-201ENST00000425328 970 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 HMGB1P45-201ENST00000435986 653 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC068135.1-201ENST00000446164 246 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AL096803.2-201ENST00000450032 677 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC008379.1-201ENST00000463655 464 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 NAMPTP2-201ENST00000505629 1115 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC122134.1-202ENST00000569111 1201 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 MIR3670-2-201ENST00000582974 65 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 MIR3670-1-201ENST00000584160 65 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 MIR3670-3-201ENST00000584855 65 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 MIR3670-4-201ENST00000612260 65 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC004696.1-201ENST00000614345 607 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC004808.1-201ENST00000627671 721 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 CYP3A51P-201ENST00000633513 256 ntBASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SHROOM3Q8TF72 AC009487.4-201ENST00000624969 3585 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms