Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 RNU1-112P-201ENST00000364401 164 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 RNU6-821P-201ENST00000390995 107 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 RPL31P1-201ENST00000398116 372 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AL445529.1-201ENST00000398713 389 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 RNU2-28P-201ENST00000410457 189 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AIMP1P1-201ENST00000418670 937 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AC245291.1-201ENST00000419501 328 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 RPL31P12-201ENST00000422587 358 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 DPRXP1-201ENST00000426312 460 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 VDAC1P3-201ENST00000434069 851 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 RPS24P6-201ENST00000452670 400 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 MTATP6P14-201ENST00000455189 673 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 MTND2P39-201ENST00000457230 764 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 SNRPGP3-201ENST00000469405 227 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 RNU6-276P-201ENST00000516114 96 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AC109635.4-202ENST00000531666 412 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AC087481.2-201ENST00000565492 330 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AC138915.2-201ENST00000569776 97 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 DPRXP5-201ENST00000604662 539 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AC026790.2-201ENST00000606282 430 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 AC018755.4-201ENST00000619715 454 ntBASIC2.46□□□□□ -2.02
LINC01560Q8TB33 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LINC01560Q8TB33 Z99496.1-201ENST00000469424 1477 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC092326.2-201ENST00000624772 1561 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AF127577.6-201ENST00000623352 2191 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 SNORA51.2-201ENST00000364595 132 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AL360182.1-201ENST00000397433 468 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 SKINT1L-201ENST00000401057 817 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 RN7SKP284-201ENST00000411002 343 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 RPS15AP6-201ENST00000420703 385 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AL445669.2-201ENST00000454425 421 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 RPS20P24-201ENST00000457473 361 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 HMGB1P25-201ENST00000468402 607 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 VN1R17P-201ENST00000472048 1090 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 RN7SL442P-201ENST00000473804 320 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC010486.1-201ENST00000511793 424 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC091163.3-201ENST00000518269 1144 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC010376.1-201ENST00000522101 334 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 HIGD1AP10-201ENST00000527837 282 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC008127.2-201ENST00000549925 1075 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 YWHAZP1-201ENST00000556286 722 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 MIR4435-1-201ENST00000582552 80 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AL355812.1-201ENST00000603215 216 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AL109620.1-201ENST00000618738 1197 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AL158163.2-201ENST00000619110 700 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC123767.1-202ENST00000620407 817 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC006963.1-201ENST00000624003 1052 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC048347.1-201ENST00000624621 427 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 AC013437.2-201ENST00000639587 677 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 MKKS-204ENST00000639674 192 ntBASIC2.45□□□□□ -2.02
LINC01560Q8TB33 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01560Q8TB33 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01560Q8TB33 MTCO1P23-201ENST00000415223 1526 ntBASIC2.44□□□□□ -2.02
LINC01560Q8TB33 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01560Q8TB33 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01560Q8TB33 AL672167.1-206ENST00000356293 943 ntBASIC2.44□□□□□ -2.02
LINC01560Q8TB33 snoZ40.1-201ENST00000364540 72 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms